Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02144 ATGGGGCAAGAGAACCTCTCAGCTCACAAGAGAAGCAGCGCCGCCAACGCCCTTCCAACCACCAACGGCCGAGCACGCTCCGCCCCCCGTGGCCGCCAGATCCAGAAGACCTTCAACAACATCAAGATCACCATCCTCTGCGGTTTCGTCACCATCCTTGTCCTTCGCGGCACCATCGGCGTCAACCTCTCCTCCTCCGACGCTGATGCCGTCAACCAGAGCCTCATCGAGGAGACCAACCGCATTCTCGCTGAGATCCGCTCCGACTCCGACCCCGACGACAACGACACCTCTTTCAGCCACAACACCACCGCCGCCTTCTCCCTTGGCCCCAAGATCTCCGATTGGGATCAACAACGCCAACAATGGCTCCAGCAAAACCCTGAATACCCTAGTTTCGTGAGAGGTAAAGCTCGAATCTTGCTCCTCACTGGTTCACCTCCAAAACCCTGTGACAACCCAATTGGTGATCATTACTTGTTGAAGTCGATTAAGAACAAAATTGATTACTGTAGATTGCACGGGATTGAGATTGTGTACAATTTGGCGCATTTGGATAAGGAACTTGCTGGGTATTGGGCCAAATTGCCAATGATTAGAAGGTTGATGTTCTCACACCCTGAGGTGGAGTGGATTTGGTGGATGGATAGTGATGCTTTCTTCACTGACATGAAGTCTTGGATTGCTGTGAATACCGGCAGCTTCTTGTTTCGGAATTGCCAGTGGTCTTTAGATTTGCTTGATGATTGGGCTCCCATGGGCCCCAAGGGTCCAGTGAGGGAGGAGGCTGGTAAGGTCTTAACTGCGAATTTGAAGGGTCGCCCGGCATTTGAGGCCGATGATCAATCTGCATTGATATACCTTTTGTTGTCCAAAAAGGAGAAGTGGATGGATAAGGTTTTCCTTGAGAATTCTTACTACCTGCACGGTTACTGGGCTGGCTTGGTTGACCGGTATGAAGAGATGGTTGAGAAGTACCATCCCGGATTAGGAGATGAGAGGTGGCCTTTCGTGACACATTTTGTGGGATGTAAACCTTGTGGGAGCTATGGAGATTATCCTGTTGAGAGGTGCCTCAGTAGTATGGAGAGGGCTTTCAATTTTGCTGATAATCAGGTGCTCAAGCTCTATGGTTTCCGTCACCGTGGCTTGTTGAGCCCTAAGATCAAGAGAATAAGAAATGAGACAGTTACTCCTTTGGAGTATGTAGATCAGTTTGATATCAGAAGACATTCTACAGTGAGCAGTGAATCAAAAAGCCAGTGA 1266 0.4968 MGQENLSAHKRSSAANALPTTNGRARSAPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLSSSDADAVNQSLIEETNRILAEIRSDSDPDDNDTSFSHNTTAAFSLGPKISDWDQQRQQWLQQNPEYPSFVRGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDKELAGYWAKLPMIRRLMFSHPEVEWIWWMDSDAFFTDMKSWIAVNTGSFLFRNCQWSLDLLDDWAPMGPKGPVREEAGKVLTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMVEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEYVDQFDIRRHSTVSSESKSQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02144 421 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 137 256 IPR029044 -
Aip01g02144 421 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 9 224 IPR008630 GO:0016021|GO:0016757
Aip01g02144 421 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 223 414 IPR008630 GO:0016021|GO:0016757
Aip01g02144 421 MobiDBLite consensus disorder prediction 1 31 - -
Aip01g02144 421 Pfam galactosyl transferase GMA12/MNN10 family 137 225 IPR008630 GO:0016021|GO:0016757
Aip01g02144 421 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 9 224 - -
Aip01g02144 421 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 223 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02144 Aip-Chr1 114781701 114783044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02144 1 420 Glycosyltransferase AT5G07720 72.985 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02144 K08238 - gmx:100793238 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02144 01 114781701 114783044 Aip01g02144 01 114781701 114783044 ECH