Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02130 ATGGGTCCGAACGAAGACCGATCCGAAATAGTGTTCTTCGACGTCGAAACAACCGTTCCAACCCGACCCGGTCAGGGTTTTGCGATTCTTGAGTTCGGAGCCATTCTTGTGTGCCCGAGAACGTTGACGGAGCTCCGAAACTACTCCACACTGGTTCGACCCGCCGACCTCTCACTCATTTCGCCCTTGTCGGAGCGCTGCAACGGTATCACCGCTGACGCCGTCGCCGCCGCACCTACCTTCGCTGACATCGCCGACGCGGTTTACGACCTCCTCCATGGCCGGATTTGGGCGGGTCACAATATCTTAAGATTCGACTGTGCTCGGATCAGAGAGGCATTTGCTGCTATCAATCAGCAAGCACCAGAGCCAAAGGGTGCTATTGACTCTCTGGTTGTGTTAACACAAAAATTTGGAAGAAGAGCTGGTAATATGAAGATGGCTTCTCTTGCTACATATTTCGGGCTTGGACAGCAAACACATAGGAGCTTAGATGATGTTCGAATGAATCTTGAAGTACTTAAATACTGCTCAACAGTTCTATTCTTGGAGTCTAGTCTCCCAGATATATTGACTGCAAACAGTTGGATTTCACCCAATGCTATTACCAGAAGTCGTAGTAACGGGAAATCTCCCATAGATGGAGGCTCATCAAATATGAACAAGGATTTTGTAATGTCATCATCTGCCACTGCAACCAAGGAAGAAAATCATCCAATACTTTCTCTTACAAGGGGCAATGCAAATGGAGCTGTCGTAGATACTGCACAGTCCAATATAGATAAACAAGACTCTTTCGATCTACGTACTCTTGGTGATGAAATACAAAAGTCCATTCAGTCTGATGTTGCCATGGATGAAAAACCCACACAAGAGTCAACTGAGATGTCTTCCTCATCTTTTGTGTCTCCAGCATGCAGCAGCTACGTTGTTCTAGAACCGGATGAAATATGTATTCCTTCTATTGATGCATCTCTTGTTCCATCTCTCTTTGGCAGTCGGAATATAGAATTACAGCACAGTGGTTTCCCCTTTCAGCTTCATTGCACTAGTCTGAAAGTTCGGTTTGGAATAAGCACAAAGTTTTACGATAATGCTGGTCGGCCGCGGTTAAATTTTGTAGTTGACGCATCACCGAGTTTATGTAAGGTTCTTGATGCATGTGACAGTGTTGTACAAAAGTTATCCGTGGATTCTGGAAGCAGCTCTGATTGGAGGCCAGTTGTTATTAGAAAAGAAGGCTTCTTCAACTATCCGACTGCCAGATTGCATATACCTACAGCAGTATGTGGAGACGTTGCCTTCTATGCCACTGAGATATATCAGAGAGAATCATCTGGCACTGTGCAAAGACTCCTCTTCAGCAAGTTTGATGCCGAAGAACTGGGTTCGTTGTTCACGCCTGGGACATTTGTGGACGCATTCTTCTCCCTAGATCCATATGACTATCAGCAGAATGCAGGGATCAAACTAGTTGCCAAAAAGTTGATTATCGATTGCAAGTAA 1506 0.4542 MGPNEDRSEIVFFDVETTVPTRPGQGFAILEFGAILVCPRTLTELRNYSTLVRPADLSLISPLSERCNGITADAVAAAPTFADIADAVYDLLHGRIWAGHNILRFDCARIREAFAAINQQAPEPKGAIDSLVVLTQKFGRRAGNMKMASLATYFGLGQQTHRSLDDVRMNLEVLKYCSTVLFLESSLPDILTANSWISPNAITRSRSNGKSPIDGGSSNMNKDFVMSSSATATKEENHPILSLTRGNANGAVVDTAQSNIDKQDSFDLRTLGDEIQKSIQSDVAMDEKPTQESTEMSSSSFVSPACSSYVVLEPDEICIPSIDASLVPSLFGSRNIELQHSGFPFQLHCTSLKVRFGISTKFYDNAGRPRLNFVVDASPSLCKVLDACDSVVQKLSVDSGSSSDWRPVVIRKEGFFNYPTARLHIPTAVCGDVAFYATEIYQRESSGTVQRLLFSKFDAEELGSLFTPGTFVDAFFSLDPYDYQQNAGIKLVAKKLIIDCK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02130 501 MobiDBLite consensus disorder prediction 201 222 - -
Aip01g02130 501 CDD DEDDh 11 175 - -
Aip01g02130 501 MobiDBLite consensus disorder prediction 283 298 - -
Aip01g02130 501 MobiDBLite consensus disorder prediction 279 298 - -
Aip01g02130 501 Gene3D - 4 180 IPR036397 GO:0003676
Aip01g02130 501 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 5 499 - -
Aip01g02130 501 SUPERFAMILY Ribonuclease H-like 8 178 IPR012337 -
Aip01g02130 501 SMART exoiiiendus 9 183 IPR013520 -
Aip01g02130 501 Pfam Exonuclease 11 174 IPR013520 -
Aip01g02130 501 PANTHER PROTEIN NEN3 5 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02130 Aip-Chr1 114498603 114501928 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02130 - - ccaj:109808157 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02130 01 114498603 114501928 Aip01g02130 01 114498603 114501928 ECH