Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02123 ATGGCTGCTACCTCCTTGTGTTCATCAACCCTCCAATCCCAAATCAATGGAATCAATCTTTCTAAAACCTCTCTTTCCCAACCACCTTCCCTCACTTTCTCTAGGAGGAGATTTTCAACCATAGTGAAGGCTTCGTCTCGTGTGGACAAGTTTTCAAAGAGTGACATCATTGTTTCTCCGTCAATTCTTTCTGCCAACTTTTCGAAATTGGGAGAGCAGGTGAAAGCAGTGGAGTTAGCTGGTTGTGATTGGATTCATGTTGATGTAATGGATGGTCGTTTTGTTCCAAACATTACAATTGGACCTCTTGTGGTTGATGCATTACGCCCAGTGACTGATCTTCCTCTGGATGTGCACCTGATGATTGTAGAACCTGAACAGCGGGTGCCAGATTTTATCAAGGCAGGAGCTGACATAGTCAGTATCCACTGTGAGCAATCTTCCACCATTCATTTGCATCGGACAGTTAATCAAGTGAAAAGCCTGGGAGCTAAAGCTGGAGTTGTCCTAAACCCTGCTACCCCACTAAGTGCAATAGAATATGTTCTCGATGTAATAAAGAGCAAAAAAAACTTCTTTCACAACATATTGAATTTCTGCATTCCGAGTTTTATCGAGAGCCAAGTAAAGAAAATTGCTGATTTGAGAAGATTGTGTGTGGAGAAGGGTGTAAATCCATGGATTGAAGTGGATGGTGGTGTTGGTCCTGCAAATGCTTACAAGGTGATTGAAGCTGGAGCTAATGCTCTCGTTGCTGGTTCTGCTGTGTTTGGAGCTAAAGATTATGCTGAAGCTATAAGAGGTATCAAAGCCAGCAAAAGACCTGAACCAGTTGCTGTGTGA 843 0.4294 MAATSLCSSTLQSQINGINLSKTSLSQPPSLTFSRRRFSTIVKASSRVDKFSKSDIIVSPSILSANFSKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPATPLSAIEYVLDVIKSKKNFFHNILNFCIPSFIESQVKKIADLRRLCVEKGVNPWIEVDGGVGPANAYKVIEAGANALVAGSAVFGAKDYAEAIRGIKASKRPEPVAV 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02123 280 Hamap Ribulose-phosphate 3-epimerase [rpe]. 55 272 IPR026019 GO:0004750|GO:0006098
Aip01g02123 280 SUPERFAMILY Ribulose-phoshate binding barrel 50 273 IPR011060 -
Aip01g02123 280 PANTHER - 17 267 - -
Aip01g02123 280 TIGRFAM rpe: ribulose-phosphate 3-epimerase 58 270 IPR026019 GO:0004750|GO:0006098
Aip01g02123 280 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 1. 85 99 IPR000056 GO:0005975|GO:0016857
Aip01g02123 280 Gene3D Aldolase class I 46 276 IPR013785 -
Aip01g02123 280 CDD RPE 57 270 IPR000056 GO:0005975|GO:0016857
Aip01g02123 280 Pfam Ribulose-phosphate 3 epimerase family 58 257 IPR000056 GO:0005975|GO:0016857
Aip01g02123 280 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 17 267 IPR000056 GO:0005975|GO:0016857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02123 K01783 - gmx:100817791 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02123 01 114281276 114284615 Aip01g02123 01 114281276 114284615 ECH