Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02109 ATGAACTCCATGGCTCTAAAATCCTTCGTTGGACTCCGACAATCCTCGTTGGAAACCACCCCTTTCACCGTCCACCAGAAGCCCGCCATCATCAGCCTCCCCCAGAAGTTCAAGGTCATTGCCGGAAAAACCAGCCCCAAGCTCCAAGGCCGGAACCTCCGCGTCGCAATCGTCGGCGGAGGCCCTGCCGGGGGCTCTGCCGCGGAGACCCTAGCAAAGGGAGGCATCGAAACGTTCCTAATAGAACGGAAAATGGATAACTGCAAGCCGTGCGGGGGCGCCATTCCGCTATGCATGGTGGGAGAGTTTGAGCTGCCATTAGACATCATCGACCGGCGCGTGACGAAGATGAAGATGATATCACCGTCGAATGTCGCCGTGGACATTGGAAGGACCTTGAAGCCGCACGAGTACATTGGAATGGTGAGACGTGAGGTTTTGGACGCGTACCTTAGAGATAGGGCAAAAGAGAACGGTGCCACGGTTATCAACGGATTGTTCTTGAAGATGGATATGCCTAAAGATAAGAACTCACCTTATTTGCTGCATTATTCTGGGTATGATGGTAAAACCGGTGGGGTCGGTGAGAAGAGAACACTGGAGGTGGATGCTGTCATTGGTGCCGATGGGGCTAATTCTAGAGTTGCTAAGGCCATTGATGCTGGTGACTATGAATATGCCATTGCATTTCAGGAGAGGATAAAGATCCCGGATGATAAAATGGTGTATTATGAAAATCTTGCGGAGATGTACGTTGGGGATGATGTATCCCCAGATTTCTACGGTTGGGTGTTTCCCAAATGCGACCATGTTGCCGTTGGAACAGGTACAGTAACACACAAATCAGACATCAAAAAATTCCAGCTGGCAACAAGAAAAAGAGCAGAGGACAAGATCACTGGAGGCAAGATCATCCGAGTGGAGGCTCATCCCATCCCCGAACACCCCCGCCCCCGAAGATTATCAGGAAGGGTGGCCCTTGTGGGGGATGCAGCCGGCTATGTGACAAAATGCTCCGGGGAAGGGATCTATTTCGCGGCAAAGAGTGGGAGAATGTGCGCGGAGGCGATCGTGGAAGGATCGGAGAATGGGAAGAGGATGGTGGATGAAGGGGATTTGAGGAAGTACTTGGAGAAGTGGGACAAGACATATTGGCCGACTTATAAGGTATTGGATGTGCTTCAGAAAGTGTTTTATAGGTCGAATCCGGCGAGGGAGGCGTTTGTGGAGATGTGTGCTGATGAATATGTTCAGAAGATGACATTTGATAGCTACTTGTATAAGACAGTAGTGCCTGGAAATCCATTGGAGGATATCAAGTTGGCCATTAACACCATTGGGAGCTTGGTCAGAGCTAATGCTATCCGGAGGGAAATGGACAAACTCAATGTATGA 1395 0.5032 MNSMALKSFVGLRQSSLETTPFTVHQKPAIISLPQKFKVIAGKTSPKLQGRNLRVAIVGGGPAGGSAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFELPLDIIDRRVTKMKMISPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRDRAKENGATVINGLFLKMDMPKDKNSPYLLHYSGYDGKTGGVGEKRTLEVDAVIGADGANSRVAKAIDAGDYEYAIAFQERIKIPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKSDIKKFQLATRKRAEDKITGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGNPLEDIKLAINTIGSLVRANAIRREMDKLNV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02109 464 TIGRFAM BchP-ChlP: geranylgeranyl reductase 54 451 IPR010253 GO:0015979|GO:0015995|GO:0045550
Aip01g02109 464 Pfam Pyridine nucleotide-disulphide oxidoreductase 54 223 IPR023753 GO:0016491
Aip01g02109 464 SUPERFAMILY FAD/NAD(P)-binding domain 53 435 IPR036188 -
Aip01g02109 464 TIGRFAM ChlP: geranylgeranyl reductase 53 451 IPR011774 GO:0045550
Aip01g02109 464 TIGRFAM GG-red-SF: geranylgeranyl reductase family 55 357 IPR011777 GO:0016628
Aip01g02109 464 PANTHER OS01G0265000 PROTEIN 38 463 - -
Aip01g02109 464 Gene3D - 52 463 IPR036188 -
Aip01g02109 464 PANTHER GERANYLGERANYL DIPHOSPHATE REDUCTASE 38 463 - -
Aip01g02109 464 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 54 76 - -
Aip01g02109 464 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 201 216 - -
Aip01g02109 464 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 322 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02109 Aip-Chr1 113963158 113965181 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02109 K10960 - gmx:100814603 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02109 01 113963158 113965181 Aip01g02109 01 113963158 113965181 ECH