Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02106 ATGGATCCTGTGCAAATTCCATATTATTCCAACTTCCTTCTTAAAATTACAGTCTCAACTTTCACCTTCTTCACTCCGATTCCCAGGCAGCTTCAAATGGCGGCGGCGGCTTCAGCAACAGCGCCTACCTTCACCGTTGGAACCGCCTACAGAGGAACCTCCCTCCCTCAATCGAAGCCTCTCGGAGGACTTAGGTTTAACTCGCAGAACCCCCTCAAGAACTTCTGCGGCCTCAAGGCTTCATCTTCCGTCACATTGGAGTCCCAATTATCGTTCTCCGGCAAAGAAACCGTTTCCGCCCTCCGAGCATCTTTTGCATCCAAGGCACAAACCCAAGACAGGACTATCCACTACAATCTTCAGCCTCAGGCATCGTTCAGAGTCGCCGTTCTCGGTGCCGCCGGAGGAATTGGCCAGCCTCTCGCTCTGCTCATCAAGATGTCCCCGCTGGTTTCTGATTTGCACCTTTATGATATTGCCAATGTCAAGGGTGTTGCTGCTGACATCAGTCACTGCAACACGCCTTCGCAGGTCAGGGATTTCACCGGAGCTGCCGAGTTGGCTAACTGTTTGAAAGGGGTTGATGTTGTTGTTATCCCCGCCGGAGTTCCAAGGAAGCCAGGGATGACTCGCGACGACCTTTTCAACATCAATGCCGGCATTGTTAGGGACTTGGTTTCGGCTGTGGCCGATAATTGCCCAGGTGCTTTTATTCACATCATCAGTAATCCGGTGAACTCCACTGTGCCTATTGCGGCCGAGGTTCTGAAGCAGAAGGGTGTGTATGATCCTAAGAAGCTCTTTGGTGTTACTACCTTGGATGTTGTCAGGGCAAACACATTTGTTGCTCAGAGGAAGAACCTGAAGCTGATTGATGTTGATGTCCCTGTTGTTGGGGGCCATGCTGGGATTACCATACTTCCCCTGCTGTCGAAGACAAAGCCCTCTGCGAGTTTCACTGGTGAAGAGATTGAAGAGTTAACTGTTAGGATTCAGAATGCAGGAACAGAAGTTGTTGAAGCAAAGGCTGGTGCCGGATCTGCTACTCTGTCTATGGCATATGCGGCTGCTAGATTCGTTGAGTCATCCCTTCGTGCTCTCGATGGAGATGGGGACGTGTATGAGTGCTCGTTTGTACAATCAGACCTGACTGAGCTTCCATTTTTTGCTTCAAGGGTCAAACTCGGCCGGAAAGGAGTTGAGGCTTTGATTCCATCTGATCTCCAAGGGTTGACTGAATATGAACAGAAGGCTTTGGAAGCACTTAAGCCGGAACTTAAGGCCAGCATCGAAAAGGGGATTGCTTTTGCTCAGAAGCAAACGGTTGCTGCTTAA 1335 0.5011 MDPVQIPYYSNFLLKITVSTFTFFTPIPRQLQMAAAASATAPTFTVGTAYRGTSLPQSKPLGGLRFNSQNPLKNFCGLKASSSVTLESQLSFSGKETVSALRASFASKAQTQDRTIHYNLQPQASFRVAVLGAAGGIGQPLALLIKMSPLVSDLHLYDIANVKGVAADISHCNTPSQVRDFTGAAELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINAGIVRDLVSAVADNCPGAFIHIISNPVNSTVPIAAEVLKQKGVYDPKKLFGVTTLDVVRANTFVAQRKNLKLIDVDVPVVGGHAGITILPLLSKTKPSASFTGEEIEELTVRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDGDVYECSFVQSDLTELPFFASRVKLGRKGVEALIPSDLQGLTEYEQKALEALKPELKASIEKGIAFAQKQTVAA 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02106 444 Gene3D - 124 270 - -
Aip01g02106 444 CDD MDH_glyoxysomal_mitochondrial 126 437 IPR010097 GO:0006099|GO:0030060
Aip01g02106 444 SUPERFAMILY LDH C-terminal domain-like 270 437 IPR015955 GO:0003824|GO:0016616
Aip01g02106 444 Pfam lactate/malate dehydrogenase, NAD binding domain 127 269 IPR001236 GO:0016491
Aip01g02106 444 ProSitePatterns Malate dehydrogenase active site signature. 270 282 IPR001252 GO:0006108|GO:0016615
Aip01g02106 444 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 271 436 IPR022383 GO:0016616
Aip01g02106 444 PANTHER MALATE AND LACTATE DEHYDROGENASE 56 444 - -
Aip01g02106 444 PANTHER MALATE DEHYDROGENASE, GLYOXYSOMAL 56 444 - -
Aip01g02106 444 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 121 270 IPR036291 -
Aip01g02106 444 Gene3D - 271 442 IPR015955 GO:0003824|GO:0016616
Aip01g02106 444 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 127 438 IPR010097 GO:0006099|GO:0030060
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02106 Aip-Chr1 113789717 113791413 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02106 K00026 - gmx:100783173 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02106 01 113789717 113791413 Aip01g02106 01 113789717 113791413 ECH