Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02094 ATGGCAGGCGACAGGAGCAAGAAGCTCAAAGCTTCTGAAAAGTCCGAGAATTTGGACGAAGTTCACGGACAGCTCCTCATCAACATCGAGAAATTGCAACAGATCCAAGACGACCTCGAAAAGATTAATGACAAGGCAGGTGATGAAGTTCTGGAGATAGAACAGAAGTACAATGAGATTAGGAAACCGATTTACGACAAACGAAACGAATTGATCAAATCTATTCCTGATTTCTGGTTGACTGCATTTATGAGTCATCCCACTCTCTCTGAGCTTCTGAATGAGGAAGACATAAAGATATTTAAGTATTTGGCTTCTCTCGAAGTTGAAGATCATAAAGATGTCAAATCAGGCTTCAAAATCACCCTTAATTTCAATCCAAATCCTTATTTTGAGGAAACAAAGCTTGTAAAGACCTTTAATTTCCTTGAAGAGGGAACAACAAAAATTACTGCCACCCCCATAAAATGGAAAGAGGGCAAGGGCATACCCAATGGAGTCAGTCATGAGGATAAAGGGAACAAGCGGACTCTTGATGATATCAGTTTCTTTAGCTGGTTTAGTGACTGTGAGCAGAAAGATGATATGGATGAGATTCATGATGAGGTTGCAGAAATAATCAAGGATGATTTATGGCCAAACCCACTCACTTATGTCAACAATGAGGAGATTGATGACGAGGATGGTGATGATGAAGCTAATGATGAGGAAAATGATGAGGATGATTCTGAAGACGATGATCAAGAGGATGAAGATGACGAGGAAGATGATGACAACGATGACGATAATGGCAATTGA 798 0.401 MAGDRSKKLKASEKSENLDEVHGQLLINIEKLQQIQDDLEKINDKAGDEVLEIEQKYNEIRKPIYDKRNELIKSIPDFWLTAFMSHPTLSELLNEEDIKIFKYLASLEVEDHKDVKSGFKITLNFNPNPYFEETKLVKTFNFLEEGTTKITATPIKWKEGKGIPNGVSHEDKGNKRTLDDISFFSWFSDCEQKDDMDEIHDEVAEIIKDDLWPNPLTYVNNEEIDDEDGDDEANDEENDEDDSEDDDQEDEDDEEDDDNDDDNGN 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02094 265 MobiDBLite consensus disorder prediction 217 265 - -
Aip01g02094 265 Coils Coil 29 49 - -
Aip01g02094 265 Pfam Nucleosome assembly protein (NAP) 73 218 IPR002164 GO:0005634|GO:0006334
Aip01g02094 265 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 4 251 IPR002164 GO:0005634|GO:0006334
Aip01g02094 265 SUPERFAMILY NAP-like 8 218 IPR037231 -
Aip01g02094 265 MobiDBLite consensus disorder prediction 221 265 - -
Aip01g02094 265 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 4 251 - -
Aip01g02094 265 Gene3D Nucleosome assembly protein 76 224 - -
Aip01g02094 265 Gene3D - 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02094 Aip-Chr1 113466962 113469918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02094 K11290 - gmx:100793432 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02094 01 113466962 113469918 Aip01g02094 01 113466962 113469918 ECH
Aip01g02094 01 113466962 113469918 Aip01g02094 01 113466962 113469918 PCT