Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02053 ATGGATGAAGCACAGATGCAGGTATGGGAAGGGTACATAGATTGGAGGAACAGACCTGCCATAAGAGGAGTTCATGGTGGAATGCTTGCAGCTTCCTTCGTTTTAGCGGTGGAGGTATTGGAGAACCTAGCATATATTGCAAATGCAAGTAATCTTGTTATGTACGTGTCCAAATTCATGCACTTTTCACCATCCAGCTCTGCCAACATTGTCACAAACTTCATGGGAACAGCTTTTCTTCTTGCTATTCTTGGTGGATTCCTTGCAGATGCTTTTTTCACCACTTATTCCATATATCTCATAAGTGCTGCTATAGAATTCGTGGGTCTACTAATTCTAACAATACAAGCTCATATACCAGCACTGAAACCACCAGGCTGCATCATGGGAACCACCAACAGTGGTGCATGCGAGAAAGTTGACGGTGGTGGAGATGCAGCTATGCTATTTGCAGGGCTGTATCTGGTGGCGCTCGGCGTCGGCGGCATCAAAGGATCGCTTCCTCCGCACGGTGCAGAGCAGTTTGACGAGAGCACAGCAGAGGGAAGGAAGCAGAGGTCTTCATTCTTTAATTACTATGTGTTTAGCCTCTCATGTGGTGCTTTGATTGCAGTCACTGTTGTGGTTTGGATTGAAGACAACAAGGGTTGGCAATGGGGTTTGGGTGTCTCAACTGCATCAATATTGATCTCTATTCCACTTTTTCTTCTTGGTTCTCACAAGTACAGGAACAAGGTTCCTGTTGGAAGCCCCATCACAACCATGCTCAAGGTAATTGCAGCAGCAATTTGCGACAAGTGGTGCAAAGCAGGGAAGAACTCAAGCAATGCTATAATGAACATGAGCATGTCCACAAGCCCATCTGAAATACTTGAAACAGAGGAAACCAACAACAATGTCAAGGAAGCTCATCAATATCATCATCAAAGCCCGTTATCCGAAAGCCTCAAATTCCTGAACAGAGCAGTGACATCACAACCATGCCACCCAATGCTCCAATGCAGAGTGAAGGAAGTTGAAGAAGTCAAAGTAGTCCTAAGAATCCTCCCCATTTTCATGTCAACCATAATGCTAAACTGTTGCCTAGCTCAACTTTCCACCTTCTCAATCCAACAATCATCCACCATGGACACAAATCTTGGTTCCTTCAAGGTCCCACCAGCTTCTCTCCCTGTATTCCCAGTTCTCTTCATCATGGTTCTTGCCCCCATGTACGACCACGCCATCCTCCCATTCGCAAGAAAAATAACCAGAACCGAAACTGGAATCACGCATTTACAAAGAATTGGAACAGGGTTGGTTCTTTCCATAGTGGCCATGGCAGTTGCCGCGTTAGTCGAAACAAAGAGAAAGAAAACGGCGTTGATTCATGGTCTAACGGATTCAACGGAGCCTCTTCCCATAACGTTCTTGTGGGTGGCGTTACAGTACTTGTTTCTTGGCTCTGCTGATCTTTTCACTCTTGCTGGGATGATGGAGTTCTTCTTCACTGAAGCGCCATGGAGCATGAGGTCTCTTGCAACCGCGCTTTCTTGGGCTTCTCTTGCCATGGGTTATTACTCCAGCACTGTTCTTGTTTCGCTCATTAACAAGGTCACAAGTGTGGTTGGACACACGCCATGGTTGTTGGGTTCCAACTTGAATCACTATCATCTTGAGAGGTTTTACTGGTTTCTCTGTGCTCTTAGTGGAATCAACTTTCTTCATTATCTATTCTGGGCTTCTTCCTACAAATACACAAATATGATAATAATACCACCACCTAGATCAGTGCTTTGA 1779 0.4519 MDEAQMQVWEGYIDWRNRPAIRGVHGGMLAASFVLAVEVLENLAYIANASNLVMYVSKFMHFSPSSSANIVTNFMGTAFLLAILGGFLADAFFTTYSIYLISAAIEFVGLLILTIQAHIPALKPPGCIMGTTNSGACEKVDGGGDAAMLFAGLYLVALGVGGIKGSLPPHGAEQFDESTAEGRKQRSSFFNYYVFSLSCGALIAVTVVVWIEDNKGWQWGLGVSTASILISIPLFLLGSHKYRNKVPVGSPITTMLKVIAAAICDKWCKAGKNSSNAIMNMSMSTSPSEILETEETNNNVKEAHQYHHQSPLSESLKFLNRAVTSQPCHPMLQCRVKEVEEVKVVLRILPIFMSTIMLNCCLAQLSTFSIQQSSTMDTNLGSFKVPPASLPVFPVLFIMVLAPMYDHAILPFARKITRTETGITHLQRIGTGLVLSIVAMAVAALVETKRKKTALIHGLTDSTEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTEAPWSMRSLATALSWASLAMGYYSSTVLVSLINKVTSVVGHTPWLLGSNLNHYHLERFYWFLCALSGINFLHYLFWASSYKYTNMIIIPPPRSVL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02053 592 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 581 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aip01g02053 592 Gene3D MFS general substrate transporter like domains 1 583 IPR036259 -
Aip01g02053 592 PANTHER PROTEIN NRT1/ PTR FAMILY 4.7 11 581 - -
Aip01g02053 592 SUPERFAMILY MFS general substrate transporter 145 574 IPR036259 -
Aip01g02053 592 CDD MFS_NPF4 28 575 - -
Aip01g02053 592 Pfam POT family 100 542 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02053 Aip-Chr1 110601645 110606525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02053 3 581 Organic Solute Cotransporters AT1G69850 65.470 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02053 - K14638 gmx:100796577 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02053 01 110601645 110606525 Aip01g02053 01 110601645 110606525 ECH