Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02038 ATGACGAACTTGGCGGCGGACGAAGCGTGCTGGACGAGGGGAAGAAGCTGCCGTCGCGAAGAATGGCGCTCGTCAATGGGCTTGCTTGTGATTCAACTAACAGCAGCATTCAAGAATCTTCATCCACCAGAATGTGGAAATGAGAGCAGCACATGCAAGGGTCCAACAGCGGGTCAAATGGCGTTTCTTCTCTGCGGATTCGGCCTTCTTCTGATTGGTGCAGCCGGTGTTAGACCATGTAACTTAGCATTTGGTGCAGATCAATTCAATCCAAACACTGAATCAGGAAAAAAAGGCGTCAACAGCTTCTTCAATTGGTACTTCTTCACCTTCACCTTTGCACAAATGGTGTCCCTCACACTAATTGTGTATGTTCAATCAAATGTGAGTTGGGCCCTTGGTCTTGGAATCCCTGCGGCTTTGATGCTTCTTTCAGTTGTGGTCTTCTTCTTGGGTACCAAGATTTATGTGAAGGTTCAACCAAGTGGTAGCCCCATAACTAGTATTGTGCAAGTTTTAGTGGTTGCAATCAAGAAAAGGGGACTCAAAAAACTACCTCAAAAAGAGTATCCAATGCTTTCACTCTTCAATTATGTCCCACCTAAGTCTTTGAACTCTAGGCTTCCTTACACTCATCAGTTCAGGGCACTGGACAAAGCTGCAATTATGACCCCACAAGATAAAATAAATCCTGATGGATCTGCAGCTGAACCATGGAAGCTTTGTAGCATGCAGCAAGTGGAAGAAGTGAAATGCTTGGTGAGGGTGTTACCTATTTGGTTCTCAGCAATTTTGTACCATTTAGTTATTGTTCAGCAGCACACTATTCTTGTGTTCCAAGCACTTCAATCAGATAGAAGAGTTGGCCACACCAACTTCAAGATCCCAGCTGCATCTTACTATGTTTTCCTCATGTTGTGTATGACTCTCTGGTTGCCAATCTATGACCGGATATTAGTCCCTTTGATGCGCCGAGTTACGGGAAAAGAAGCCGGCATCACGCTCCTTCAGAGGATGGGAATCGGCATATTCCTCGCTATACTTAGCATGATAGTGTCTGCTTTTGTTGAAGGACATAGAAGAAGCCTAGCTCTAAGCAGTCCTATAGGAATGCAGCCAAGAAAAGGCGCGATTTCATCGATGTCAGCACTTGTTTTGATTCCTCAATTGGCACTAGCAGGGCTATCTGAATCGTTCACTGCTGTTGGACAAGTTGAATTTTACTATAAGCAGTTCCCGGAGAACATGAGAAGCATTGGACAATCACTATTCTATTGTGGCATGGCAGGATCAAGTTACTTGAGCACTCTGTTGATCTCAATTGTTCATAAAACCACGGCCAAATCGGCCACTGGCAATTGGTTGCCGGAGGATCTTAACAAGGGTAGATTGGACTACTTCTATTTCATGATTGCAGTTCTAGAAGTCATGAATTTGGGGTACTTTTTGATGTGTTCAAGATGGTACAAATACAAAGGAAATAACGATAGTTATAATAATAATAGTAGCATTGAACTTAATGGAGTAACTGAAACTTCTGAAACATCAATTAATGGTGTTTAA 1563 0.4325 MTNLAADEACWTRGRSCRREEWRSSMGLLVIQLTAAFKNLHPPECGNESSTCKGPTAGQMAFLLCGFGLLLIGAAGVRPCNLAFGADQFNPNTESGKKGVNSFFNWYFFTFTFAQMVSLTLIVYVQSNVSWALGLGIPAALMLLSVVVFFLGTKIYVKVQPSGSPITSIVQVLVVAIKKRGLKKLPQKEYPMLSLFNYVPPKSLNSRLPYTHQFRALDKAAIMTPQDKINPDGSAAEPWKLCSMQQVEEVKCLVRVLPIWFSAILYHLVIVQQHTILVFQALQSDRRVGHTNFKIPAASYYVFLMLCMTLWLPIYDRILVPLMRRVTGKEAGITLLQRMGIGIFLAILSMIVSAFVEGHRRSLALSSPIGMQPRKGAISSMSALVLIPQLALAGLSESFTAVGQVEFYYKQFPENMRSIGQSLFYCGMAGSSYLSTLLISIVHKTTAKSATGNWLPEDLNKGRLDYFYFMIAVLEVMNLGYFLMCSRWYKYKGNNDSYNNNSSIELNGVTETSETSINGV 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02038 520 SUPERFAMILY MFS general substrate transporter 57 491 IPR036259 -
Aip01g02038 520 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 21 500 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aip01g02038 520 CDD MFS_NPF1_2 24 489 - -
Aip01g02038 520 Pfam POT family 26 454 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aip01g02038 520 PANTHER PEPTIDE/NITRATE TRANSPORTER 21 500 - -
Aip01g02038 520 Gene3D MFS general substrate transporter like domains 22 497 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02038 Aip-Chr1 109779004 109783436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02038 26 504 Organic Solute Cotransporters AT5G62680 63.636 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02038 - - adu:107467595 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02038 01 109779004 109783436 Aip01g02038 01 109779004 109783436 ECH