Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02010 ATGGCGCACCGCCCCACTCAGCGGCGGAATCAGGCGGCGCCTCTACAATACAATCCCTCATCATCCACAGTTACCGCTCCGCCAAAGGCAAAGCACACCACCACCGCCACCGCCACCGCCGGCGCCGCCGCCGTCCCTTTTCCGTACCCGAAACCAAATCCAGATCTCATAGCACAACTATCTAGACCTAATAACCATTCTTCTTTCATGGCGAAACAGTTCTCAAGCCTAAACTTGGGTCCAAACACTCACAAAACCAAACAACACGCTCTCTCACACGCAAAATCCATGACATCATCTTGCATAGTTGATTCCTCCTCCAAGCTCTCGCTTCTCAAACCGAACACCGCCTCCAGTAACAATAAACTTGCACCGAAGGTTGAAAAAGAGGGTGCTAAGAGAAGTTCATTGGAGAAGAAGCCACAGAAATCGAAACTTCACGGTTTGTTGGCGATGAAGAACGAGAACGAGAAGAGGAAGAAGAAGAGTTCTGTGGTTGAAAAGTCAAAGAATCCTGTAGAAGAAGAAGAAGAAGAAGGACACGGTGATGGTGATAAGAGAAGAAGCTGTGTGGTTTCTTCGGTGAGTAGCGGAAGAAGGAGGTCCATGTGTGGACCCTCAGAAGCTGAATTAGGAGATGTATTTGCGATCAACGGTGTAAAATTGGTGTCAGCTGATATGCCACCGTTTATGCAGATCCACGCCGTTGATTGTGCCAGAAAGACTCTTGATAGCATGGAAAAGTTCACATCCAAGACCCTTGCACTCTCCCTCAAAAAGGAATTTGATGGGGTGTATGGGCCAGCATGGCACTGTATAGTGGGGACTAGTTTTGGGTCATATGTGACACATTCAGTTGGAGGGTTCCTATATTTCTCAATGGATCAGAAATTGTACATCCTCTTGTTTAAGACCGCTGTTCAAAAGGTTAACTGA 936 0.4754 MAHRPTQRRNQAAPLQYNPSSSTVTAPPKAKHTTTATATAGAAAVPFPYPKPNPDLIAQLSRPNNHSSFMAKQFSSLNLGPNTHKTKQHALSHAKSMTSSCIVDSSSKLSLLKPNTASSNNKLAPKVEKEGAKRSSLEKKPQKSKLHGLLAMKNENEKRKKKSSVVEKSKNPVEEEEEEGHGDGDKRRSCVVSSVSSGRRRSMCGPSEAELGDVFAINGVKLVSADMPPFMQIHAVDCARKTLDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSYVTHSVGGFLYFSMDQKLYILLFKTAVQKVN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02010 311 Pfam Dynein light chain type 1 221 305 IPR001372 GO:0007017|GO:0030286
Aip01g02010 311 PANTHER INTRASTRAND CROSS-LINK RECOGNITION PROTEIN-LIKE 1 309 - -
Aip01g02010 311 SMART Dynein_light_2 215 305 IPR001372 GO:0007017|GO:0030286
Aip01g02010 311 SUPERFAMILY DLC 218 305 IPR037177 GO:0007017|GO:0030286
Aip01g02010 311 MobiDBLite consensus disorder prediction 112 192 - -
Aip01g02010 311 MobiDBLite consensus disorder prediction 126 188 - -
Aip01g02010 311 MobiDBLite consensus disorder prediction 1 48 - -
Aip01g02010 311 MobiDBLite consensus disorder prediction 9 40 - -
Aip01g02010 311 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 216 306 IPR037177 GO:0007017|GO:0030286
Aip01g02010 311 PANTHER DYNEIN LIGHT CHAIN 1 309 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02010 Aip-Chr1 107521706 107523317 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02010 - - aip:107633823 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02010 01 107521706 107523317 Aip01g02010 01 107521706 107523317 ECH