Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01990 ATGCCTTCACCGAAGAGCGTAAAGCAGAGGGTGCTTGAGTGCCTCACCAAGCTCTCCGACCGTGATACTCACTCCATCGCCGCTGCCGAGCTCGAGTCCATCGCCCTCAGCCTCGACCAAACCACCGTGCCGTCGTTCCTCTCCTCCGTCCTCGCCACCGACTCCTCCGACAAAACCCTCGTCCGCAGGCAATGCGTGCAGCTCCTCGGGTTTCTAGCCGAGACGCACGGCAGCGCTCTCTCTCCCTACCTCTCCAAGATCCTAATCGCCGTCCTCCGCCGGCTCCGTGACCCGGACTCGGCGGTCCGATCCGCATGCGCTGATTCCGTTGCGGCATTGTCGTGTCACGTCAGCGGCAAGCAACCGTTCTTCTCGTCGTTCGCAAAGCCGCTATCGGAAGCGCTGTTCACGGAGCAGGACGCGAACGCGCAGGCCGGCGCAGCGCTGTGTTTGGCCGCTGCGATCGGCGGAGCTCCGGATCCGGACCCTGCCAGGCTGGCGAAGCTGCTGCCGAGGTTCGAGAAGCTCTTGAAGCGCGACGGATTCAAGGCGAAGCCGGCGCTTCTGGCGCTGATTGGGAGCGTTGTACGCGCCGGCGGTGCGTCGAGCCACGCGGCACTTAGCAACTTAGTTCCTTGCTTAGTAGAGTCGCTTAGTAGCGAGGACTGGGCGGCGAGGAAGACTGCGGCAGAGGCGCTGGCAGTGGTAGCTGTCGTGGAGAGGGACTCCTTGTCGGAATTCAAGGCTGGGTGCATGAAAGTTTTTGAGAATCGACGATTTGATAAGGTAAAGTTGGTTCGGGAAGTCATGAATCAGATGTTGGAGGCATGGAAGCATGTTCCCGATCTTTCTGATGAATTTTCGCCACCTCCTCATTCGATAGCTTCTTCCAAAGAGAATGCAAGTGACGGGCGCTATCCCCCAGCCACTCAAAATTCATGTAGTCCCGGTTCAGTGATGGTAAATTTGCGGAAAAAATCCATTCCTGGTAGAAGATTCAGTGCACCGCATAGTTCTTCTTCTAGCAATGCGAAGAATATTAGTCCTTCAAGTGTTAACAAGAGAGTGAGTTCTGTTGTTTCGCGAAGATTAAACTATAAGAATTGGGATGTTCAAATTGCAGTGTCAAATGCTCCCTCTGCAGTCATGGCTGATCAGGGTAATCCTTGGGAGAGGGATGAAACTGCCAAAAAGGATAAAAACAGATTTTTAAAGCCAGAAACAAAGCGGGCTCTATTTAGTAAAATTCCTGATGAAAAGATGCATAAGTTTGGTGTGTCCAAAGCTGGATCTCGTGTAGTTCCTGTAAGTAATGTCACTAAAGATCAACTTAGGAATGACAAAGAGAGTGAAGAGTTGTCTTTGATCCGTGATCAATTACATCAAATCGAGCAGCAGCAGTCTAGTCTACTTGATCTTCTGCAGGTTGTTCCTAATACATAA 1443 0.5274 MPSPKSVKQRVLECLTKLSDRDTHSIAAAELESIALSLDQTTVPSFLSSVLATDSSDKTLVRRQCVQLLGFLAETHGSALSPYLSKILIAVLRRLRDPDSAVRSACADSVAALSCHVSGKQPFFSSFAKPLSEALFTEQDANAQAGAALCLAAAIGGAPDPDPARLAKLLPRFEKLLKRDGFKAKPALLALIGSVVRAGGASSHAALSNLVPCLVESLSSEDWAARKTAAEALAVVAVVERDSLSEFKAGCMKVFENRRFDKVKLVREVMNQMLEAWKHVPDLSDEFSPPPHSIASSKENASDGRYPPATQNSCSPGSVMVNLRKKSIPGRRFSAPHSSSSSNAKNISPSSVNKRVSSVVSRRLNYKNWDVQIAVSNAPSAVMADQGNPWERDETAKKDKNRFLKPETKRALFSKIPDEKMHKFGVSKAGSRVVPVSNVTKDQLRNDKESEELSLIRDQLHQIEQQQSSLLDLLQVVPNT 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01990 480 MobiDBLite consensus disorder prediction 287 318 - -
Aip01g01990 480 MobiDBLite consensus disorder prediction 333 354 - -
Aip01g01990 480 MobiDBLite consensus disorder prediction 330 354 - -
Aip01g01990 480 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 475 IPR033337 GO:0005874|GO:0008017
Aip01g01990 480 Pfam HEAT repeat 210 237 IPR000357 GO:0005515
Aip01g01990 480 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 5 475 - -
Aip01g01990 480 SUPERFAMILY ARM repeat 7 274 IPR016024 -
Aip01g01990 480 Coils Coil 446 466 - -
Aip01g01990 480 MobiDBLite consensus disorder prediction 290 318 - -
Aip01g01990 480 Gene3D - 3 420 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01990 Aip-Chr1 106284247 106287815 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01990 - - gmx:100789197 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01990 01 106284247 106287815 Aip01g01990 01 106284247 106287815 ECH
Aip01g01990 01 106284247 106287815 Aip01g01990 01 106284247 106287815 PCT