Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01956 ATGGCATTATCACGCGTTGTTCTGCTTCTCGGAGTGTTATTGCTTCTCTGCCTTTCTAAAGTTTCATCTGATGTGAAGATAGAAGATGAAGATGATGAACAACTGAGCCTGCCCGCGGACAAGCCACTTATTGTGAGAGACAGCAACAGAAGGCTAATGCAAGATATAGATTGTGGTGGACTATGCAAAGAAAGGTGCAGTTTGCACTCAAGACCGAATTTGTGCAACAGGGCTTGTGGGACATGCTGTGTGAGGTGCAAGTGTGTCCCTCCTGGTACTGCTGGTAACAGGGAACTATGTGGTTCTTGCTACACTGACATGACCACCCATGGTAACAAGACCAAGTGCCCTTAA 354 0.4661 MALSRVVLLLGVLLLLCLSKVSSDVKIEDEDDEQLSLPADKPLIVRDSNRRLMQDIDCGGLCKERCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNKTKCP 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01956 117 Pfam Gibberellin regulated protein 57 117 IPR003854 -
Aip01g01956 117 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 7 117 - -
Aip01g01956 117 PANTHER GIBBERELLIN-REGULATED PROTEIN 2-RELATED 7 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01956 Aip-Chr1 104218804 104221406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01956 - - gmx:100789576 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01956 01 104218804 104221406 Aip01g01956 01 104218804 104221406 ECH
Aip01g01956 01 104218804 104221406 Aip01g01956 01 104218804 104221406 PCT