Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01947 ATGTCGCTCAAGCGGCGCCCCGAAGATGCTAAGCACAAATCTGACACTTCCACTCCCGACGATAAGCGGCCGAGGCATCCACCCTTTGCCAATGTGGTGTGCGAGTTGATGAGGATACAGTCAGTCAAGCATTTGCTGGAGCCGATTTTAGAGCCCTTGATTCGTCGAGTGGTTAAGGAGGAAGTAGAATTGGCCTTAAGGAAGCATTTAACCAGCCTGAAACAGACTGGTGGAAAGGAGATGCATACTTCTGAATTGAGAAGCTTGCAGCTGCAGTTTGAAAACAACATTTCTCTTCCAGTGTTTACTGGAGCTCGGATTGAAGGAGAGGATGGCTCCAACTTAAGAGTAGTATTAGTTGATGTGTCGACAGGGAAAGTTGTTAGTTCAGGACCTGAATCCTTAGCTAAGGTGGAAATTGTGGTCCTTGAGGGTGATTTTGAAGATGAAAGTGAAATTTGGATGCCTGAAGAGTTTAAGAGCAACATTGTGAGGGAGAGAGAAGGAAAAAAACCCCTCCTTACCGGAGATGTAGCTGTATATCTTAAAGATGGGACTGGTATGGTTGGTGAAATTTCATTTACAGATAACTCAAGCTGGACAAGGAGTCGTAGGTTCAGGCTTGGTGCAAAAGTTATGGACAACTTTGATGGCGTTAGAATAAGAGAAGCAAAGACAGAGTCATTCATTGTTAGGGATCACCGAGGAGAATTGTACAAGAAGCACCACCCTCCTAATCTGTTTGATGAAGTTTGGAGACTGGAGAAGATAGGCAAGGATGGAGCTTTCCACAAACGTCTGAGTCGGGAAAAGATCTACAGCGTGAAAGATTTTCTTACACTTCTGAATCTGGATCCTGCAAAGCTACGCAGTATACTGGGCACTGGCATGTCTGCAAAGATGTGGGAAATAACTGTGGAGCATGCTCGAACTTGTACAATTGATACCACGAGGCATGTTTACTTCCCTCCCTCCTCTCAACAGAAAGCTGGTGTGGTCTTCAATGCTGTGGGACAAGTCACGGGACTACTCTCTGAGTGTGAGTATGTCCCGGTACATAAGCTGTCGGAAACTGAAAAGGCTGATGCTCAAGAATTGGTCATTTCTGCAATTAAACAAGGCGAAAAAATTTCCTCTTATGAAGATGAAGCATCTCTTTTGGAGGGTTCTTCACATCTAACTAATGTTCTTTACTCCGAGAGCTCACCAAATACCGAGGGATCCAGTGCCAACAAACTTTTGGCTCCTCAAAAGACTGAAGGTCCCACTTACACACCAGCAAGTGCCTCTTCTCCGGATATCATGTCATCCATTTATTCTGTTGGAGGCACCAGTGCCTTGGATGACTTCTGCTTGCCGAACTTTGACAGCATGGGCTTAAGATATGATCCTACTAGTCTTGGTTTTCCGGTCCACCAGGTTGCCAGCACTCTGATCTGCGACCCTGATCCAATGGCCCATGCATTTGGAGACGAAGATCATCTGCGTTTTTTCGATACCGATCAAGATTTGCAGAGCGCTGTGGATAGCTTCATGCTGACGCGCTCATCTGTTGCCATCGGTAAAGCTCAGAGGAGATGGAGAAAGGTAACCAACGTCCTAAAATGGTTCATGGTGAGGAAACGAAAAAGCGATGCTAATCAGCAGCGGCAGTTGCGAAGAACATGA 1668 0.4586 MSLKRRPEDAKHKSDTSTPDDKRPRHPPFANVVCELMRIQSVKHLLEPILEPLIRRVVKEEVELALRKHLTSLKQTGGKEMHTSELRSLQLQFENNISLPVFTGARIEGEDGSNLRVVLVDVSTGKVVSSGPESLAKVEIVVLEGDFEDESEIWMPEEFKSNIVREREGKKPLLTGDVAVYLKDGTGMVGEISFTDNSSWTRSRRFRLGAKVMDNFDGVRIREAKTESFIVRDHRGELYKKHHPPNLFDEVWRLEKIGKDGAFHKRLSREKIYSVKDFLTLLNLDPAKLRSILGTGMSAKMWEITVEHARTCTIDTTRHVYFPPSSQQKAGVVFNAVGQVTGLLSECEYVPVHKLSETEKADAQELVISAIKQGEKISSYEDEASLLEGSSHLTNVLYSESSPNTEGSSANKLLAPQKTEGPTYTPASASSPDIMSSIYSVGGTSALDDFCLPNFDSMGLRYDPTSLGFPVHQVASTLICDPDPMAHAFGDEDHLRFFDTDQDLQSAVDSFMLTRSSVAIGKAQRRWRKVTNVLKWFMVRKRKSDANQQRQLRRT 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01947 555 Pfam Calmodulin binding protein central domain 247 312 IPR046830 -
Aip01g01947 555 MobiDBLite consensus disorder prediction 1 27 - -
Aip01g01947 555 MobiDBLite consensus disorder prediction 397 429 - -
Aip01g01947 555 PANTHER OS02G0177800 PROTEIN 1 543 IPR012416 GO:0005516
Aip01g01947 555 Pfam Calmodulin binding protein C-terminal domain 319 379 IPR046829 -
Aip01g01947 555 PANTHER CALMODULIN-BINDING PROTEIN 60 A 1 543 - -
Aip01g01947 555 Pfam Calmodulin binding protein-like N-terminal domain 89 234 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01947 Aip-Chr1 103843500 103848345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01947 1 361 Calmodulin-binding Proteins AT5G62570 62.604 1.26e-161 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01947 - - gmx:100793156 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01947 01 103843500 103848345 Aip01g01947 01 103843500 103848345 ECH