Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01935 ATGCTTGGTACAACTGTGCTAATCCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGATGAGAAGGCAAGAGTTATTCAAACACTGCTCTTTGTAGCTGGAATCAACACATTGCTGCAAACATTGTTTGGAACTCGATTGCCTGCAGTAATTGGTGGCTCTTATACCTATGTTCCAACAACAATCTCAATTATTCTCTCTGGTCGATTCAGTGATGAACCAGATCCTATAGAGAAATTCAAGAGGATAATGCGGGCTACTCAGGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTAGGCTTTAGTGGCCTCTGGCGTAATGTTGCAAGGTTCTTAAGTCCTCTTTCAGCAGCTCCTTTGGTCGCACTTGTTGGTTTCGGGCTATACGAGTTAGGCTTTCCTGGGGTTGCTAAATGTATAGAAATTGGATTGCCGCAGCTTATATTGCTAGTTTTTGTGTCGCAGTTTGTACCCCATGTGCTCAAAGGTGGAAAACATGTCTTTGACCGTTTTGCTGTGATATTTACGGTTGCAATTGTATGGTTATATGCATTTCTGCTCACTGTTGGAGGGGCCTATAACCACGCCGCACCCAAAACACAATCAACCTGTCGTACTGATCGTTCTGGCCTAATAGAAGCTGCTCCATGGATACGGGTCCCTTACCCTTTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTCATTGCTGTTTACCGGTATGCAAGTGCAACACCAATGCCACCATCTATTCTCAGCCGGGGTATTGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTGGGGAACTGGCAACGGATCATCCGTATCTGTAGAAAATGCTGGTCTTTTGGCTTTGACTCGTGTTGGCAGTCGGAGAGTTGTGCAAATATCTGCAGGGTTTATGATTTTCTTTTCAATTCTTGGTAAATTTGGAGCAGTTTTCGCTTCCATTCCACCTCCAATTGTTGCTGCCTTGTATTGCTTGTTCTTCGCTTATGTTGGTGCTGGAGGCCTTAGTTTTCTTCAATTTTGCAACCTCAACAGTTTCAGGACTAAGTTTGTATTAGGCTTCTCCATCTTCCTTGGCTTGTCCATTCCGCAGTACTTCAACGAGTACACGGCAATCTACGGTTATGGTCCAGTTCACACCGGCGCAAGATGGTTCAATGACATAATCAATGTCCCATTCCAGTCAAAAGCATTTGTTGCTGGTGTCGTCGCGTATTTCTTGGACAACACGCTACATAAGGACCCAACCATTAGGAAGGACAGAGGAAAACATTGGTGGGACAAGTACAGGTCCTTCAAGGGTGATACAAGAAGTGAAGAGTTCTATTCACTGCCTTTCAATCTCAACAAGTACTTCCCTTCTGTGTAA 1449 0.4486 MLGTTVLIPTALVPQMGGGNDEKARVIQTLLFVAGINTLLQTLFGTRLPAVIGGSYTYVPTTISIILSGRFSDEPDPIEKFKRIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAAPLVALVGFGLYELGFPGVAKCIEIGLPQLILLVFVSQFVPHVLKGGKHVFDRFAVIFTVAIVWLYAFLLTVGGAYNHAAPKTQSTCRTDRSGLIEAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFIAVYRYASATPMPPSILSRGIGWQGVGILLSGLWGTGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFVLGFSIFLGLSIPQYFNEYTAIYGYGPVHTGARWFNDIINVPFQSKAFVAGVVAYFLDNTLHKDPTIRKDRGKHWWDKYRSFKGDTRSEEFYSLPFNLNKYFPSV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01935 482 Pfam Permease family 1 393 IPR006043 GO:0016020|GO:0022857|GO:0055085
Aip01g01935 482 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 1 482 - -
Aip01g01935 482 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 1 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01935 Aip-Chr1 103335548 103341059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01935 1 482 Organic Solute Cotransporters AT5G49990 82.816 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01935 - - gmx:100791553 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01935 01 103335548 103341059 Aip01g01935 01 103335548 103341059 ECH
Aip01g01935 01 103335548 103341059 Aip01g01935 01 103335548 103341059 PCT