Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01920 ATGCGATCGTCTCCTTCCTTCATTGCCTTTTCTCTGTTATTCATCGCACTCCTACCATCTATTCAGGCACACGCACCGATTAACGCTCACTTCAAATCTCTTTCGCCGTTTTCCTCCGCTCTCGAAACCCTCCAGAAACAGCTAGGTTACACTTTCAAGAAAATTGGGCTTCTTCGCCGTGCCATGACCCATGCTTCGTTCTCTGAGGAGAACAACAAAGCCTTGGCAGTTTTGGGCGGCAGTGTCATCGAAACCGCCGTGTCCTTCAAGCTTCTGTCCAAGGACATTGATGTTTCGGCTTCTGAGCTGAACAAAATGGTATCTCGAGTCTCAAATGTGGAATCTTCTTGTGCCGTCGATGGAACGCGGCTGAGCTTGCACAAGGTGGTTAGAGTTGCTCCCAATACCAACGCTTCTGCGCCTTCTGTGGTTTGCGGCGCGTTTCGAGCTATCTTTGGTGGCATTGCTATTGATACCGGAAATTCAGATGACGCAGGAAGTGTTTTCTGGAACCTTCATGGTGATCTTCTTGGCAATGCACTATCAATCCTCCCAAACGCACACTCATCTTCTCCGTCGTGCCGTCGCATCTCCACCGCATCGCTGACTCTTCTTCCCCATTGTGCCGTCATCATTGCCGTTAGAGACGCACGTCAGCGTTGCCTTGTGTCGTCCCCATCGTGCCGCCGCTGTTGTTGTGCTGGACCTTATCGACGGCGCCGCCACCGTCGGCCTTTGGAAGGAACCCATCTTGCGCCGTCACTGGCTCTGCAGAACCGGATTCGTTGCATCGTCAGCCCTAAGCTGTCTTCGACACCCCTGGTAACGCGAAGGCAGGAGCACAGGATTGTGAAACTACGATTGCGGCTGCACGGGGTGCAGAACACAGTGGGGCTCTTGGAAGGAAAGGCACTTCGCCACAAAGCTGCCTCTGGTGATGACGGTGAATTGTGGATGTGGACCAGAGGGGCACTATGTAGGCTGCGCGGCGGACGTCGAAAACTCTGTTACGGTGGTGGAATTGGAAGTAATTGTATGTAG 1041 0.5293 MRSSPSFIAFSLLFIALLPSIQAHAPINAHFKSLSPFSSALETLQKQLGYTFKKIGLLRRAMTHASFSEENNKALAVLGGSVIETAVSFKLLSKDIDVSASELNKMVSRVSNVESSCAVDGTRLSLHKVVRVAPNTNASAPSVVCGAFRAIFGGIAIDTGNSDDAGSVFWNLHGDLLGNALSILPNAHSSSPSCRRISTASLTLLPHCAVIIAVRDARQRCLVSSPSCRRCCCAGPYRRRRHRRPLEGTHLAPSLALQNRIRCIVSPKLSSTPLVTRRQEHRIVKLRLRLHGVQNTVGLLEGKALRHKAASGDDGELWMWTRGALCRLRGGRRKLCYGGGIGSNCM 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01920 346 Gene3D Ribonuclease III domain 39 180 IPR036389 GO:0004525|GO:0006396
Aip01g01920 346 ProSiteProfiles Ribonuclease III family domain profile. 41 160 IPR000999 GO:0004525|GO:0006396
Aip01g01920 346 CDD RIBOc 57 160 IPR000999 GO:0004525|GO:0006396
Aip01g01920 346 PANTHER RIBONUCLEASE III 21 162 IPR011907 GO:0003723|GO:0004525|GO:0006364
Aip01g01920 346 SMART riboneu5 56 182 IPR000999 GO:0004525|GO:0006396
Aip01g01920 346 Pfam Ribonuclease-III-like 57 162 IPR000999 GO:0004525|GO:0006396
Aip01g01920 346 PANTHER RIBONUCLEASE 3 21 162 - -
Aip01g01920 346 SUPERFAMILY RNase III domain-like 35 174 IPR036389 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01920 - - ahf:112695617 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01920 01 102729511 102732131 Aip01g01920 01 102729511 102732131 ECH