Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01912 ATGGCTGACCTTAATCTAGCAAGACTAATTATCGGAATAATTGGAAATGTCATCTCTTTTTGTTTATTCATGTCACCAATGCCTACATTTGTGCAAATATGCAAAGCAAAATCAGTGCAAGATTTCAAGCCAGATCCTTATGTAGTGACAGTACTGAATTGTGCAATGTGGTCATTCTATGGAATGCCATTCGTGACCAAAAATAACGTTCTTGTTCTCACAATCAATGGCTTTGGCTTCTTCCTTGAGCTCTTCTACACTGGCATCTTCCTTGCATTCTCACCTTGGGGTAAAAGGAGGAAGATTCTGCTAGCCCTTTTAGCCGAGGCCATCTTCGTTGCTTTGGTGGTATTTTTTGTGTTGTATTTCGTTGAATCCTTGAAGGAAAGAGCCTTAATTGTTGGACTCATATGCATTTTCTTCAACATCCTTATGTACTTTTCACCCTTGACCGTCATACGTCAAGTAATCAAAGACAAAAGTGTGAAGTACATGCCTTTCTGCCTTTCCCTTGCTAACTTCTGCAACGTCGTCTGGACGGTATATGCATGTCTTAAATGGGATCTTTTCATTCTGATTCCAAATGCCTTAGGAGCACTTTCAGGATTGGTGCAACTTATTCTCTATGCTGTTTTCTACCGATCAACCAACTGGGACCAAGAAAGCGCAATCGAAGTATAG 681 0.4038 MADLNLARLIIGIIGNVISFCLFMSPMPTFVQICKAKSVQDFKPDPYVVTVLNCAMWSFYGMPFVTKNNVLVLTINGFGFFLELFYTGIFLAFSPWGKRRKILLALLAEAIFVALVVFFVLYFVESLKERALIVGLICIFFNILMYFSPLTVIRQVIKDKSVKYMPFCLSLANFCNVVWTVYACLKWDLFILIPNALGALSGLVQLILYAVFYRSTNWDQESAIEV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01912 226 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Aip01g01912 226 Pfam Sugar efflux transporter for intercellular exchange 10 95 IPR004316 GO:0016021
Aip01g01912 226 Gene3D - 129 217 - -
Aip01g01912 226 Gene3D - 7 95 - -
Aip01g01912 226 PANTHER RAG1-ACTIVATING PROTEIN 1 6 222 - -
Aip01g01912 226 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET5 6 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01912 Aip-Chr1 102500853 102502869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01912 1 193 Miscellaneous Gene Families AT5G62850 58.247 8.77e-80 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01912 K15382 - gmx:100810948 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01912 01 102500853 102502869 Aip01g01912 01 102500853 102502869 ECH