Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01894 ATGGCTACCCAGTCTCCCACTCAAAATCAAAATCAAGGTGCTGAAAGTGCGGAACCAGCAGCAAATGTGGATCAGCAGGGTGCCACAGAGGAACCTGTCAAACAGAGCTCCACGCCTTTGGTTTTTGTAAATTCGGAGCCGATGAGGGAAGAACAAGTTCAGAATGCTGTGAAATTTCTGTCACACCCCAAAGTTAAAGGCTCTCCTGTCATGTACAGGCGATCCTTTTTGGAAAGGAAGGGCCTTACCAAGGAGGAGATAGATGAAGCCTTTCGGCGTGTGCCAGATTCAGCTCCGACTGTGCAGACAGGTGGTGTCACTCAAGATGGACAAGTAAAATCTTCATCGAACATTCAACAACAGGCCCAACCACAAGCTTTGCAACCTGGTCTACCTGCCTCTGCTGGAGTTAATACTTCATCAGCAACCTTGTCCCGCTCCAGATTTCACTGGTCCCATGCCCTTATTGCAATTGGAGTATTGGCTGCTTCAGGTGCTGGAACAGCTATAGTAGTTAAGAATTCCATTCTTCCTCGCTTGAAATCCTGGATACGCAAAGTTGTCGTAGAAGAAGATGATGAAGAATTAAAGAAATTAGACAGAAAACCGACACTGGTGGAGGAAGCTGCACAAGCTGCAAAGTCTGCTGCGGCTGCAGCTGCAGATGTTGCAAAAGCTAGCCAAGATATGCTGATTTCAAAAGAGGAAGAGAGAAAACACTTTGTGGAAGTTGTGAGTCTTTTAGATATGCAAGTACAGGAAATGAAGTCAATGACTAATGCATTAAGACGAATAGAAGTGAGATCTACATCCCCACCTGTATCATACGAACCACCGAGTTCTCTTCATCCAAAGTCATATATGGAGATAATGAACATGGTTCAAAGAGGGGAGAAGCCTTCAAACACTAGACCTTGGGAGGTTAGTCAGGTTCAGAACTCGTCTACCCAGGTGCCTCATGCTCAGGGAAATGGAGAATACTTGAATTCAAAGGTCCAAGATTCCACTCAATCCAATGGTGACGGTGATGATGCGCTACCCTGGTGGCAGAGGAAAAATGCTAGAATCAGAGAAATTGGTAATGAAACTGAATATAATGGAAATGGATCAAGTTATGGTGTTGCATCCAATCAGCCACCACCCCAACGCACATGGGTTCCCCCTCAACCTCCCCCCATAGCAATGGCAGAGGCTGCAGAAGCAATCAGGCGCCCGAAGCCAGCGGCCCAAAAGGATCAGATGTCGGATACTCAGTCTGTAGGTAATTCTTCAGATGTGTCTGATGAGGTTACTAGGATCCCAAGGCGATCAGAATCTGAAGGTGCGGTCGAGGGTGGCAGCAGCAGCTCGATTCCCAGCACAGTTGAGATACAAGAAGACCAAGAACTCAGACGGGAATAG 1401 0.469 MATQSPTQNQNQGAESAEPAANVDQQGATEEPVKQSSTPLVFVNSEPMREEQVQNAVKFLSHPKVKGSPVMYRRSFLERKGLTKEEIDEAFRRVPDSAPTVQTGGVTQDGQVKSSSNIQQQAQPQALQPGLPASAGVNTSSATLSRSRFHWSHALIAIGVLAASGAGTAIVVKNSILPRLKSWIRKVVVEEDDEELKKLDRKPTLVEEAAQAAKSAAAAAADVAKASQDMLISKEEERKHFVEVVSLLDMQVQEMKSMTNALRRIEVRSTSPPVSYEPPSSLHPKSYMEIMNMVQRGEKPSNTRPWEVSQVQNSSTQVPHAQGNGEYLNSKVQDSTQSNGDGDDALPWWQRKNARIREIGNETEYNGNGSSYGVASNQPPPQRTWVPPQPPPIAMAEAAEAIRRPKPAAQKDQMSDTQSVGNSSDVSDEVTRIPRRSESEGAVEGGSSSSIPSTVEIQEDQELRRE 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01894 466 MobiDBLite consensus disorder prediction 1 40 - -
Aip01g01894 466 MobiDBLite consensus disorder prediction 363 380 - -
Aip01g01894 466 Pfam Pex14 N-terminal domain 49 93 IPR006785 -
Aip01g01894 466 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 4 270 - -
Aip01g01894 466 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 304 450 - -
Aip01g01894 466 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 266 304 - -
Aip01g01894 466 MobiDBLite consensus disorder prediction 411 428 - -
Aip01g01894 466 MobiDBLite consensus disorder prediction 100 139 - -
Aip01g01894 466 MobiDBLite consensus disorder prediction 94 139 - -
Aip01g01894 466 MobiDBLite consensus disorder prediction 442 457 - -
Aip01g01894 466 MobiDBLite consensus disorder prediction 298 348 - -
Aip01g01894 466 MobiDBLite consensus disorder prediction 362 466 - -
Aip01g01894 466 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 4 270 IPR025655 GO:0005515|GO:0005778|GO:0016560
Aip01g01894 466 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 304 450 IPR025655 GO:0005515|GO:0005778|GO:0016560
Aip01g01894 466 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 266 304 IPR025655 GO:0005515|GO:0005778|GO:0016560
Aip01g01894 466 MobiDBLite consensus disorder prediction 298 343 - -
Aip01g01894 466 Gene3D - 41 103 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01894 Aip-Chr1 99966108 99970514 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01894 K13343 - gmx:100784152 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01894 01 99966108 99970514 Aip01g01894 01 99966108 99970514 PCT