Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01893 ATGGCTCTCAATTTGCCTTCCCCAGCTGAAGTCAAGTCTATTTTCTTCACCGATTCCTTCAAGTCTAACATCCTCACTGCAAAGTTTCCAGGTCATTTTGCTCTGAAAAGAAAAAACTGTGGAGCTGCAGCAGGAAGAAGAGTTTCCTGCTCAGTGCAGGTACCACCGCCACCAGCATGGCCAGGAAGGGCGGTCCCGGAACAGAACCGCAAGACTTGGGAGGGGCCGAAACCCATCTCAATCGTCGGAAGTACTGGTTCAATCGGAACTCAGACACTCGATATCGTTGCTGAGAATCCAGATAAGTTCAAAGTTGTGGCACTTGCTGCAGGTTCGAACGTAACGCTTCTTGCAGATCAGGTTAAGAGATTTAAGCCTCAACTCGTTGCTGTAAGAAATGAATCCCTAATTGCTGAACTTAAAGAAGCTTTGGCTTCCGTTGAAGAAAAGCCTGAGATCATCCCTGGAGAGCAGGGAGTTATTGAGGTTGCTCGTCACCCGGATGCTGTTAGTGTAGTCACAGGAATAGTAGGATGTGCAGGACTAAAGCCAACAGTTGCTGCAATTGAAGCAGGGAAAGACATAGCATTGGCCAACAAAGAGACATTGATTGCTGGAGGTCCTTTTGTTCTTCCTCTTGCTAAAAAGCATAATATAAAAATACTTCCAGCCGATTCAGAACATTCTGCCATTTTTCAGTGCATCCAGGGGTTGACAGAAGGTTCACTTAGGAGAATTATTTTAACTGCATCTGGAGGTGCTTTCAGGGATTGGCCTGTTGAAAAACTGAAAGATGTTAAAGTTGCTGATGCATTAAAACATCCCAACTGGAATATGGGGAAAAAGATCACCGTGGACTCGGCTACCCTTTTCAATAAGGGTCTAGAAGTAATTGAAGCACATTACTTGTTTGGAGCTGACTATGATAATATCGAAATTGTCATTCATCCACAATCTATCATACATTCAATGATAGAAACACAGGATTCATCAGTTTTGGCACAGTTGGGGTGGCCTGATATGCGTTTACCGATCCTCTATACTATGTCATGGCCCGAGAGAATTTACTGCTCTGAAATAACTTGGCCTCGCCTTGATCTTTGCAAGCTTGGTTCTTTAACATTTAAAGCTCCCGACAATGTTAAATATCCATCCATGAATCTTGCCTATGCTGCTGGTCGTGCTGGAGGAACAATGACAGGAGTTCTTAGTGCAGCAAACGAGAAAGCTGTAGAAATGTTTATTGATGAAAAGATCAGCTATTTGGATATTTTCAAGGTTGTGGAGCTAACATGTGAGAAGCATCAAGAGGAATTGGTAACATCGCCTTCGCTCGAGGAAATCGTTCACTATGACCTTTGGGCTCGAAAATATGCTGCTAGCTTGCAAAGCTCTTCCAGCTTCACTCCTATTCCTGCATGA 1422 0.4388 MALNLPSPAEVKSIFFTDSFKSNILTAKFPGHFALKRKNCGAAAGRRVSCSVQVPPPPAWPGRAVPEQNRKTWEGPKPISIVGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQVKRFKPQLVAVRNESLIAELKEALASVEEKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHNIKILPADSEHSAIFQCIQGLTEGSLRRIILTASGGAFRDWPVEKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGADYDNIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMNLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCEKHQEELVTSPSLEEIVHYDLWARKYAASLQSSSSFTPIPA 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01893 473 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase 79 207 IPR013512 GO:0070402
Aip01g01893 473 Coils Coil 130 150 - -
Aip01g01893 473 Pfam DXP reductoisomerase C-terminal domain 336 457 IPR026877 -
Aip01g01893 473 Gene3D - 381 466 - -
Aip01g01893 473 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 201 339 - -
Aip01g01893 473 SUPERFAMILY 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 369 463 IPR036169 -
Aip01g01893 473 TIGRFAM Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 77 459 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aip01g01893 473 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE-RELATED 1 466 - -
Aip01g01893 473 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 1 466 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aip01g01893 473 Hamap 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 79 462 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aip01g01893 473 PIRSF Dxp_reductoisomrs 76 468 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aip01g01893 473 Gene3D - 69 225 - -
Aip01g01893 473 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 76 225 IPR036291 -
Aip01g01893 473 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain 221 304 IPR013644 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01893 Aip-Chr1 99753421 99757719 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01893 K00099 - gmx:100790607 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01893 01 99753421 99757719 Aip01g01893 01 99753421 99757719 ECH