Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01888 ATGGAGAGACGGACTTACGATGACTCCGCGAATTTGGCGTCGGAGATCTCAATTTCAGATTACGCCTGCGGCGACGAAGACTCTTCGGTTTCAGATTGCGAGAGCAGCGTCTCCGGTGATGCACGCAACGTGTTCGATGAAAGGTTCGTGAGACTCCCCGAAGGAGACAAGGCTCGCGACCTCGTTCAGAGCAGATTAGTTAAGGGACTAGCATCGTGCGGGTTGAAATCCAACGTCGTTTCGGTTCACAGAAATGCGTGGCGTTCTGTAATGGCGCAGGCGCGTGTTCAGTGCTTCCAGATCTTCGCGCGTGCCGTTGCGAAGTTGCGTGGCGGCGATCCCAACGTGAAGTATGCATGGTATGGTGCTTCGAGCAAGGAAGAGGTTGAAGACATTATTGAGCACGGTTTCGGTGGGAAGATGCCTCTCCGTGACGGACTTCGTCTTTCGCCGGATGATTCTCCTCTCAAAAGTGTGAAAAGCTGTGGCGTTGACAAAGATGGTCTGAGGCATGTGATTCTGTGCCGCGTTATCTTGGGGAGAGTGGAGATGGTGCCACGTGGCTCCGATCCATGCGGTTCAAGTTCGGAAGATTATGATTCCGGTATGGACGGCAGCTTCTCATCTCCCGAGGGGTACGTCATTTGGAGTCAACGGGTCAACACGCATGTCTTGCCTGAATTCGTTATAAGCTTTAAACTTCATCCCTCAAAAGGTCATGTGAGGATTGAAGAGCCTTTGAAACCTTCTTCCCCTTGGATGCCATTCCCCGCTCTGATTTCTGTGCTTTCTGAGATTTTGCCTTCCTCTGATATTGCCTTGATTTCCAAGTTTCACAAAGATTATAAAGAAAAGAAAATTTCACGGCATCAATTGATACAGAAAGTAAGAGTAATAGCAGGAGACAAACTGCTCGTTGCGGCCATCAAATCTTTTAGGGAGAAGAAAATACCTGCAAGCTTTAAAGACGCAAGGTCATGGCAACCGGAAAACCATCTTCGTGGACAGAATATGGTGTCTTTTATGAACTGTGTTAGTGGATTGAAGGGAGGGAGGAATACAGAACGTGATAGAAGGCCTTACTAA 1086 0.488 MERRTYDDSANLASEISISDYACGDEDSSVSDCESSVSGDARNVFDERFVRLPEGDKARDLVQSRLVKGLASCGLKSNVVSVHRNAWRSVMAQARVQCFQIFARAVAKLRGGDPNVKYAWYGASSKEEVEDIIEHGFGGKMPLRDGLRLSPDDSPLKSVKSCGVDKDGLRHVILCRVILGRVEMVPRGSDPCGSSSEDYDSGMDGSFSSPEGYVIWSQRVNTHVLPEFVISFKLHPSKGHVRIEEPLKPSSPWMPFPALISVLSEILPSSDIALISKFHKDYKEKKISRHQLIQKVRVIAGDKLLVAAIKSFREKKIPASFKDARSWQPENHLRGQNMVSFMNCVSGLKGGRNTERDRRPY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01888 361 Gene3D - 47 234 - -
Aip01g01888 361 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 23 322 - -
Aip01g01888 361 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 23 322 IPR044964 -
Aip01g01888 361 SUPERFAMILY ADP-ribosylation 49 237 - -
Aip01g01888 361 ProSiteProfiles PARP catalytic domain profile. 35 250 IPR012317 GO:0003950
Aip01g01888 361 ProSiteProfiles RST domain profile. 247 318 IPR022003 -
Aip01g01888 361 Pfam RCD1-SRO-TAF4 (RST) plant domain 248 313 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01888 Aip-Chr1 98157037 98159869 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01888 - - adu:107491749 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01888 01 98157037 98159869 Aip01g01888 01 98157037 98159869 PCT