Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01884 ATGCTGAGGGTCGCCGCAAAGAGGTTATTTGTGACGCCGTCGCCGGCACCCCAACAGGCTATTAGGGTTCTGCCGCGATTTTACCATGAGAGGGTGGTAGATCACTACAACAATCCACGGAACGTTGGTTCCTTCGACAAGAATGACCCCACCGTGGGAACGGGTTTGGTCGGAGCACCGGCGTGCGGTGACGTCATGAAGCTGCAGATTAAGGTCGACGAGAAGACCGGCAAGATTGTTGATGCTCGCTTCAAGACCTTCGGCTGCGGCTCCGCCATTGCTTCTTCCTCTGTCGCTACTGAATGGGTAAAGGGAAAGCAGATGGAGGAAGTTTTGTCCATTAAGAACACCGAAATTGCAAAGCATCTTTCACTTCCACCAGTTAAGCTTCACTGCAGCATGCTTGCTGAAGATGCAATTAAAGCAGCTGTTAAGGACTACGAAGCTAAGCGTGCTAAGGCAACCACTGCAAATGGAGAAGAAACAACCACCGGAGAGAAGGCTGCCACAGCTTAA 516 0.5155 MLRVAAKRLFVTPSPAPQQAIRVLPRFYHERVVDHYNNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDEKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKATTANGEETTTGEKAATA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01884 171 Gene3D - 27 170 - -
Aip01g01884 171 CDD IscU_like 28 143 IPR002871 GO:0005506|GO:0016226|GO:0051536
Aip01g01884 171 TIGRFAM iscU: FeS cluster assembly scaffold IscU 28 151 IPR011339 GO:0005506|GO:0016226|GO:0051536
Aip01g01884 171 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 20 167 IPR002871 GO:0005506|GO:0016226|GO:0051536
Aip01g01884 171 Pfam NifU-like N terminal domain 28 153 IPR002871 GO:0005506|GO:0016226|GO:0051536
Aip01g01884 171 SUPERFAMILY SufE/NifU 27 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01884 Aip-Chr1 97299151 97301152 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01884 K22068 - gmx:100806169 269.24