Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01868 atgggtctaattgaggagaaccctacagcaactgagcaagcggttgatgactatctagtagacgagccggaggacgatgagtccgaggatgatgatatggatgaggatgatgacaaatccggagacgatgACCCTGGTCATGCTTATGATGCAGGCTTGAACCCGTCTTATACTACCTTACCTGAGACTCTGACTTCAGTACTACTTCATCAACGCAGCAACACAAGAAAAGAAATAGAGGAGAGTAGCTTAAAGATGGACACTGCAGAAATTGTGGATTTATCTAGTGATGATGAAGGGGGTGAAGCTGGTTCCAGGGCTCTCCATTTTGATTCTGATATTGCGAGTGGTGCAAAGCAACAGAATGTGACCAACAGAGGCCACACACCCAAACATTACAGATCTCGAAGCCATTCTAATATACAAAATTCTGAAGAAAATATGAGCCCCAGCCGTCCGAATTCTTGTCATAGTTGTTCTGGTGATTTGAAGCAAGGTCTGTTGCCCGTTGGTGACGACGCAGGCCTCTCTGATTCATCACCAATTTGTGCAGCACTACCTTGTAGGCATTTTTGGAAAGCTGGAAATTATGATAATGGGCTTGTTCCTAAAGTCAGAGTCTCAAATGCAGGCAACTATCTCAATGTCCATCCTCTGTTCCTTCATTCGAATGCAACTTCACATAAGTGGGCATTTGGTGCCATAGCTGAACTTCTGGATAATGCAGTTGATGAGATCCAAAATGGGGCTACCTATGTTATTGTAGATAGAATTTCAAACCCAAAGGATAAAAGTCCAGCATTATTGATTCAAGATGATGGTGGTGGAATGGATCCAGAAGCAATGCGTCGTTGCATGAGTTTTGGATTTTCAGATAAGTCAAAATTTGCAATCGGACAGTATGGAAATGGCTTCAAGACTGGTACCATGAGACTGGGTGCAGATGTCATTGTCTTCAGCCGCCATCTGAATAACGGGATACTGACTCAAAGCATTGGGCTTCTGTCTTATACATACATGATGCAAACACAGCTTGACAGAATTGTAGTACCCATGGTGCATTATCAGATCAATACATCAAGCGGATCCTTCGGAATATTAAATGACCAAGAGCATTTTATTTCCAATTTGTCCATAATGTTGCGCTGGTCTCCATTCACATCAGAAATAGAACTTTTGAAACAACTTGACGAAATTGGATGTCATGGTACTAAAATTATTATCTACAACTTGTGGTTCAACGATGATGGCAATTTGGAATTAGATTTTGATTTTGATACCGAGGATATTTGTATTGCTGGGGATATCAAGGAGGAGGTTGATGCACTTTCTTCCTGGGAGACATTGAATGAGCAACACACTGCTAACCGGCTTCGATATTCTCTACGTGTTTACTTGTCCATATTGTACTTGAGGTTACCAGAAAGCTTTACAATTATATTGCGAGGGCAAGTTGTGGATCTACATAACATTGCAGACGATCTTCAGTATCCTGAATTTATCTTGTATAAACCACATAGTTCAGATGAGTCTGCAGTTGTGACAACAATTGGATTTGTTAAGGAAGCTCCTGAAGTCAATGTCCATGGCTTCAATATATATCACAAAAATCGGCTGATCCTGCCTTATTGGCAGGTTGTGAGCTATCTGAGAAGTAGAGGCAGAGGAGTTGTCGGTGTCCTGAAAGCAGATTTTATTCAGCCTACTCATAATAAGCAAGATTTTGAGAGGACTTCCTTGTTTGCAAAGCTTGAACATCGCTTGAAGGAAATGACGTGGGAGTACTGGGATTCTCATTGTCAACTACTTGGGTATCAGAAAAAGAGGCCTAAGTCTCAGGTCCCCATTGATACTTTGCCGCCAAAACCACCTGGCTTTGAAATACCGGTTGCATTGAACAAAAGTACCTATCCACATAGCACGTTTGAGCAAGTATCTCCTACTAAGAGGAAAGAGAGACATGGATCTATGGACCTTCATAAGATGAAAAAGCAAACAAGGGAACAGGATTTCTCAACAAGTGTTGGTTGCAATGATGAGAATATACAGACTACTGCATGTTCTGAAGACCAGGAGGAAGACCAAGGCACTATACACTTGATACAAGTGAACACAGAACTCCATGCAAGGTGTTTGGAATTTGAAAAGACAAATGAAGAACTTTGCCACAAGGTGACAGAGCTTAGAAGCAAAATTCAAGACGCTAAGATTGAGTATAATAGCCTTTTGTCTCAAGTGCACTACCAGGACCTGATGCTAACATGTATTATAGATGGTACACCTCTTGCAGGCTAG 2295 0.3895 MGLIEENPTATEQAVDDYLVDEPEDDESEDDDMDEDDDKSGDDDPGHAYDAGLNPSYTTLPETLTSVLLHQRSNTRKEIEESSLKMDTAEIVDLSSDDEGGEAGSRALHFDSDIASGAKQQNVTNRGHTPKHYRSRSHSNIQNSEENMSPSRPNSCHSCSGDLKQGLLPVGDDAGLSDSSPICAALPCRHFWKAGNYDNGLVPKVRVSNAGNYLNVHPLFLHSNATSHKWAFGAIAELLDNAVDEIQNGATYVIVDRISNPKDKSPALLIQDDGGGMDPEAMRRCMSFGFSDKSKFAIGQYGNGFKTGTMRLGADVIVFSRHLNNGILTQSIGLLSYTYMMQTQLDRIVVPMVHYQINTSSGSFGILNDQEHFISNLSIMLRWSPFTSEIELLKQLDEIGCHGTKIIIYNLWFNDDGNLELDFDFDTEDICIAGDIKEEVDALSSWETLNEQHTANRLRYSLRVYLSILYLRLPESFTIILRGQVVDLHNIADDLQYPEFILYKPHSSDESAVVTTIGFVKEAPEVNVHGFNIYHKNRLILPYWQVVSYLRSRGRGVVGVLKADFIQPTHNKQDFERTSLFAKLEHRLKEMTWEYWDSHCQLLGYQKKRPKSQVPIDTLPPKPPGFEIPVALNKSTYPHSTFEQVSPTKRKERHGSMDLHKMKKQTREQDFSTSVGCNDENIQTTACSEDQEEDQGTIHLIQVNTELHARCLEFEKTNEELCHKVTELRSKIQDAKIEYNSLLSQVHYQDLMLTCIIDGTPLAG 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01868 764 Coils Coil 718 745 - -
Aip01g01868 764 MobiDBLite consensus disorder prediction 17 41 - -
Aip01g01868 764 MobiDBLite consensus disorder prediction 136 158 - -
Aip01g01868 764 Pfam Morc6 ribosomal protein S5 domain 2-like 460 596 IPR041006 -
Aip01g01868 764 MobiDBLite consensus disorder prediction 1 58 - -
Aip01g01868 764 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 233 324 - -
Aip01g01868 764 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN 84 749 - -
Aip01g01868 764 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 231 442 IPR036890 -
Aip01g01868 764 MobiDBLite consensus disorder prediction 111 158 - -
Aip01g01868 764 Gene3D - 218 416 IPR036890 -
Aip01g01868 764 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 84 749 IPR045261 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01868 Aip-Chr1 96528533 96543642 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01868 - - adu:107494710 1352.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01868 01 96528533 96543642 Aip01g01868 01 96528533 96543642 ECH