Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01867 ATGAAACTTACGATTGGAAAACACTGTGCAATGGGTTACATTTGTTTGAGCCATTTCTTTCTGTTTCTGGCCATAATTGGCACTGATTTTGTTTCAAGTATGGCCAATAATGAAACAGATTCCTATTGGCTTCTCAGAATAAAATCAGAACTTGTTGATCCATTAGGAGCTTTGAGCAACTGGTCTCCAACAACTCACATGTGCAACTGGAATGGTCTAACATGTTCACTTGATCAAGAACATGTTATAGGTCTGAACCTTTCTGGTTCAGGAATATCAGGTTCCATCTCAGTTGAGTTTGACCACCTCTCACATCTTCAAACACTTGACTTGTCTTCAAATTCACTTACTGGCTCCATCCCTTCAAAGCTTTTTAAGCTTCAAAATCTAACAACACTTCTCCTATACTCAAATTCTCTCTCTGGGAACATTCCTTTAGAGATAGGTAATTTGAAGAACTTGCAAGTTCTTAGAATAGGTGACAACATGTTGGAAGGTGAAATTGCATCTAGTATTGTTAACCTAACAAAGTTGACAGTGTTGGGATTAGGCTACTGCAACTTCAATGGCAGCATACCATTCAGGATCGGTGAATTGAAGAATCTGGTTTCTCTTGATTTGCAAAGTAACAGCTTTAGTGGCACCATACCTGAAGATATTCAAGGCTGCGAAATGCTTGAAACCTTTGCAGCATCAAACAACATGCTTGATGGGAACATTCCCTCCTCTATAGGCTCTCTTAAATCATTGAAAATTTTGAATCTTGCCAACAATACTCTCTCTGGATCAATTCCTAAAACCCTGAGTCATCTTTCCAACTTGACATACCTGAATTTGCTTGGAAACAAACTCAATGGAGAAATCCCTTCTGAGCTCAACAGTCTAACCCAGCTGCAGACATTAGACTTGTCCGAAAACAACCTTTCAGGACCAATACCACTCCTCAATACCAAATTACAGAATCTTGTGTCCCTGGTTCTGTCTGATAATGCTTTCACTGGTAGCATTCCAAGCAACTTCTGCCTCAAAGGTTCTTCAAAGCTTGAGCAGCTTTTCTTGTCTCAAAACATGCTGTATGGAAAATTCCCCTTGGAGCTACTCGACTGTTCCTCAATCCAACAGTTGGATCTTTCTGACAATAGCTTTGAAGGAGAGCTTCCATCCTACCTTGACATGCTGCAGAACCTCACTGATCTTGTGCTCAACAACAACAGCTTTGTTGGATCCTTACCTCCGGAAATCGGAAATATTACTAGCTTGGAAGGCCTTTTCCTGTTTGGTAACTCTTTCACAGGTACAATCCCAGTGGAGGTCGGAAGGCTTCATAGATTGAACACCATTTACCTCTATGATAACCAGATGTCTGGAACCATACCGAGAGAGTTAACAAACTGCACAAGCTTAAGGGAAATCGACTTCTTTGGAAACCACTTTACCGGGCCGATTCCAGAAACTATAGGCAAGCTTAAGGACTTGGTTGTTCTTCATCTGAGGCAGAATGACTTGTCTGGTCCAATCCCTCCGAGCATGGGGTACTGTAAGAGTCTTCAGATATTAGCATTAGCAGATAACAGCCTGTCTGGTTCGATACCACCCACATTCGGTTATCTTTCAGAACTCTTCAAAATTACCCTTTACAACAACTCCTTTGAAGGACCTCTCCCTCCTTCACTTCTTGCTCTCAAGAACCTCAAAATCATAAATTTTTCCCACAACAGGTTCAGTGGAAGTTTCTCTCCTCTCACTGGCTCAAATTCTCTAACTATACTGGACTTGACTAACAACAGCTTCTCAGGTCCCATCCCTTCTACATTGGGCAATTCCCTAAGCCTCAGCCGTCTCCGGCTCGCATACAATAATCTCACCGGAGCCATTCCTTCGGAGTTTTTCTACCTTACTGAGCTTAACTTCCTCGATTTGTCATTCAACAACTTAACAGGAGATGTGTTACCTCAACTCTCGAACTCTCACAAAATCCAACACATGCTCCTGAGTAATAACAGGTTCACTGGCCAACTACCCCCATGGTTGGCAATCTTACAAACACTTGGTGAGCTAGATCTCTCATACAACAACTTCAATGGCAGGGTGCTTTCTGAGCTTGGTAAATGCTCAAATTTGCTTAAACTCTCTCTGCATCACAACAATCTCTCAGGGGATATCCCACAAGAGATTGGAAATCTCACTTGCCTCAATGTTCTAAACTTACAAAGCAATAGTCTCTCCGGCCGCATCCCCTCAATGATTCGGCAATGCAGCAAGCTTTATGAGCTCAGGCTCTCAGAGAATTTCTTGACAGGTTCCATACCAGAAGAGCTAGGGGATCTTGCTGAATTGCAAGTGATCTTAGACTTGAGTAAAAATCGCTTCACCGGTGAGATTCCATCTTCACTTGGAAACCTTATGAAGCTAGAAAGACTAAATCTTTCTTTCAATCAGCTACAAGGCAAGGTTCCTTCATCACTGGGAAAACTCACAAGCCTCCATGTAGTGAATCTTTCTAGCAACAATCTTGAAGGCCAGATTCCCTCAACATTTTCGGGGTTCCCAAGAAGCTCATTCCTCAAAAATGAAGGCTTGTGTGGCCCACCATTGGTACCATGCTCCACATCACAGGGGAAAATGCAAATGCAGCTATCAAATATGCAAGTGGCGGCAATCATAGTAGCAACTGTTTTCACTTCCACAGTGATATGTTTGGTTATGATTTACATCATGTTGAGGATATGGTGCAATTGGAGGAAAGTTTCCATTTCAAGTTCAGATGGTGGCATTGCTGCAAAATGTGCTAATAACAATAATAAAACAGGGAATGGTGAGTATTGGAACATGAACATGAACTCTTCCTCCTTTGGGTTGATTCCTTCACCAGATAAGAAGAATAATTCAATGGCAACAACAACAGCAGCTATATGCTTCTTTGATATCAAAAAGGAAGGTGTGGATAATACAAACATATAA 2961 0.4168 MKLTIGKHCAMGYICLSHFFLFLAIIGTDFVSSMANNETDSYWLLRIKSELVDPLGALSNWSPTTHMCNWNGLTCSLDQEHVIGLNLSGSGISGSISVEFDHLSHLQTLDLSSNSLTGSIPSKLFKLQNLTTLLLYSNSLSGNIPLEIGNLKNLQVLRIGDNMLEGEIASSIVNLTKLTVLGLGYCNFNGSIPFRIGELKNLVSLDLQSNSFSGTIPEDIQGCEMLETFAASNNMLDGNIPSSIGSLKSLKILNLANNTLSGSIPKTLSHLSNLTYLNLLGNKLNGEIPSELNSLTQLQTLDLSENNLSGPIPLLNTKLQNLVSLVLSDNAFTGSIPSNFCLKGSSKLEQLFLSQNMLYGKFPLELLDCSSIQQLDLSDNSFEGELPSYLDMLQNLTDLVLNNNSFVGSLPPEIGNITSLEGLFLFGNSFTGTIPVEVGRLHRLNTIYLYDNQMSGTIPRELTNCTSLREIDFFGNHFTGPIPETIGKLKDLVVLHLRQNDLSGPIPPSMGYCKSLQILALADNSLSGSIPPTFGYLSELFKITLYNNSFEGPLPPSLLALKNLKIINFSHNRFSGSFSPLTGSNSLTILDLTNNSFSGPIPSTLGNSLSLSRLRLAYNNLTGAIPSEFFYLTELNFLDLSFNNLTGDVLPQLSNSHKIQHMLLSNNRFTGQLPPWLAILQTLGELDLSYNNFNGRVLSELGKCSNLLKLSLHHNNLSGDIPQEIGNLTCLNVLNLQSNSLSGRIPSMIRQCSKLYELRLSENFLTGSIPEELGDLAELQVILDLSKNRFTGEIPSSLGNLMKLERLNLSFNQLQGKVPSSLGKLTSLHVVNLSSNNLEGQIPSTFSGFPRSSFLKNEGLCGPPLVPCSTSQGKMQMQLSNMQVAAIIVATVFTSTVICLVMIYIMLRIWCNWRKVSISSSDGGIAAKCANNNNKTGNGEYWNMNMNSSSFGLIPSPDKKNNSMATTTAAICFFDIKKEGVDNTNI 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01867 986 ProSiteProfiles Leucine-rich repeat profile. 105 127 IPR001611 GO:0005515
Aip01g01867 986 Pfam Leucine Rich repeat 102 119 IPR001611 GO:0005515
Aip01g01867 986 Gene3D Ribonuclease Inhibitor 40 151 IPR032675 -
Aip01g01867 986 Gene3D Ribonuclease Inhibitor 152 224 IPR032675 -
Aip01g01867 986 PRINTS Leucine-rich repeat signature 106 119 - -
Aip01g01867 986 PRINTS Leucine-rich repeat signature 295 308 - -
Aip01g01867 986 ProSiteProfiles Leucine-rich repeat profile. 297 318 IPR001611 GO:0005515
Aip01g01867 986 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 654 908 - -
Aip01g01867 986 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 344 577 - -
Aip01g01867 986 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 153 397 - -
Aip01g01867 986 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 85 346 - -
Aip01g01867 986 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 584 820 - -
Aip01g01867 986 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 395 649 - -
Aip01g01867 986 Gene3D Ribonuclease Inhibitor 582 876 IPR032675 -
Aip01g01867 986 SMART LRR_sd22_2 151 177 - -
Aip01g01867 986 SMART LRR_sd22_2 103 132 - -
Aip01g01867 986 SMART LRR_sd22_2 345 377 - -
Aip01g01867 986 SMART LRR_sd22_2 632 658 - -
Aip01g01867 986 SMART LRR_sd22_2 199 222 - -
Aip01g01867 986 SMART LRR_sd22_2 561 583 - -
Aip01g01867 986 SMART LRR_sd22_2 295 324 - -
Aip01g01867 986 SMART LRR_sd22_2 441 473 - -
Aip01g01867 986 SMART LRR_typ_2 801 824 IPR003591 -
Aip01g01867 986 SMART LRR_typ_2 632 657 IPR003591 -
Aip01g01867 986 SMART LRR_typ_2 489 513 IPR003591 -
Aip01g01867 986 SMART LRR_typ_2 199 222 IPR003591 -
Aip01g01867 986 SMART LRR_typ_2 247 270 IPR003591 -
Aip01g01867 986 SMART LRR_typ_2 441 465 IPR003591 -
Aip01g01867 986 SMART LRR_typ_2 271 295 IPR003591 -
Aip01g01867 986 SMART LRR_typ_2 151 175 IPR003591 -
Aip01g01867 986 SMART LRR_typ_2 825 848 IPR003591 -
Aip01g01867 986 SMART LRR_typ_2 728 752 IPR003591 -
Aip01g01867 986 SMART LRR_typ_2 103 127 IPR003591 -
Aip01g01867 986 SMART LRR_typ_2 393 417 IPR003591 -
Aip01g01867 986 SMART LRR_typ_2 319 343 IPR003591 -
Aip01g01867 986 SUPERFAMILY L domain-like 654 865 - -
Aip01g01867 986 SUPERFAMILY RNI-like 386 718 - -
Aip01g01867 986 SUPERFAMILY L domain-like 283 388 - -
Aip01g01867 986 Gene3D Ribonuclease Inhibitor 225 345 IPR032675 -
Aip01g01867 986 Pfam Leucine rich repeat 782 838 IPR001611 GO:0005515
Aip01g01867 986 Pfam Leucine rich repeat 586 645 IPR001611 GO:0005515
Aip01g01867 986 Pfam Leucine rich repeat 234 284 IPR001611 GO:0005515
Aip01g01867 986 PANTHER - 584 820 - -
Aip01g01867 986 PANTHER - 395 649 - -
Aip01g01867 986 PANTHER - 153 397 - -
Aip01g01867 986 PANTHER - 85 346 - -
Aip01g01867 986 PANTHER - 344 577 - -
Aip01g01867 986 PANTHER - 654 908 - -
Aip01g01867 986 SUPERFAMILY L domain-like 38 313 - -
Aip01g01867 986 Gene3D Ribonuclease Inhibitor 346 581 IPR032675 -
Aip01g01867 986 Pfam Leucine rich repeat N-terminal domain 39 76 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01867 Aip-Chr1 96524497 96527610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01867 161 872 Receptor kinase-like Gene Family AT5G46330 36.718 1.59e-116 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01867 - - gmx:100818792 1433.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01867 01 96524497 96527610 Aip01g01867 01 96524497 96527610 ECH
Aip01g01867 01 96524497 96527610 Aip01g01867 01 96524497 96527610 PCT