Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01860 ATGAAGAAGACAGCGGCGGTGTTTGTGGTCAACTTGCTGCTTTTGGTGGCATTTTGTAGTGCGATCGAATCACCGCAGTACACACTAATCCACAAGGAGTCGGAATTCGAGATCAGGCTCTATCAACACTCTGTTTGGATGTCCGCGCCTGCTCTTCTTCAACTTTCCTTCCAGAAAGCCACCTGGAACGGTTTCCATAGGTTGTTTCAATTCATACAAGGTGCCAACCTTAACTTCTCTCGAATTCCCATGACTGCTCCGGTGCTGACAACAATGGTCCCCGGAGCTGGACCCCTCGAATCACAAGGGTATTATGTTAGTCTTTACTTGCCTGTCAAGTTCCAAGCCACCCCACCACTCCCATTGCCAGAACTCAGCATCAAGCCCCACAAATTCGCCAGCCACTGCATTGCGGTCAGAGAGTTCTCTGGTTTTGCCAAGGATGATAGGGTTGTCAAAGAAGCTCAAAAGCTTGCCACCTGCCTCAGCAGGTCCCCTTGGGCTGACTCAACTCCCTCCAGGAGTTCTTACTCCATTGCTCAGTATGATGCTCCTTTTAAGACCGTTAAGCCCCGGAACGAGGTTTGGGTCGACATTGATGCCCCTGATTTGGGTTGTAAATCAGTTGATGTTGCAGCATATTGA 645 0.4961 MKKTAAVFVVNLLLLVAFCSAIESPQYTLIHKESEFEIRLYQHSVWMSAPALLQLSFQKATWNGFHRLFQFIQGANLNFSRIPMTAPVLTTMVPGAGPLESQGYYVSLYLPVKFQATPPLPLPELSIKPHKFASHCIAVREFSGFAKDDRVVKEAQKLATCLSRSPWADSTPSRSSYSIAQYDAPFKTVKPRNEVWVDIDAPDLGCKSVDVAAY 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01860 214 SUPERFAMILY Probable bacterial effector-binding domain 13 199 IPR011256 -
Aip01g01860 214 Pfam SOUL heme-binding protein 22 197 IPR006917 -
Aip01g01860 214 PANTHER SOUL HEME-BINDING PROTEIN-RELATED 4 200 - -
Aip01g01860 214 PANTHER HEME-BINDING PROTEIN-RELATED 4 200 IPR006917 -
Aip01g01860 214 Gene3D Regulatory factor, effector binding domain 21 203 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01860 Aip-Chr1 95729336 95730465 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01860 - - gmx:100306073 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01860 01 95729336 95730465 Aip01g01860 01 95729336 95730465 ECH