Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01858 ATGTCATCGCCGGCGACAAGGGATCACAGGATCGTTCGACGCGTGGCGAGCCTCCCTAGAAGCATAATGGGGGAAATCTCAAGGGCATTGGGGGATGGCATGGGACTTGTAGGAATAGGAAGAAGAAGAAACCATAATCATAATCATAATCATGAGGCAAATGTTGGGCAAGGGCAAGTGCAGCCTCATGGCCCTCCATTGTTGCCACAAGAACACATAGCAGTTCCAGAAGAGTGGGCTTTTCTTGAAAGTTTTGAGCAGCAATATGGAAACAACCATCCTTTCTTTTATGCGTGCCGATTCAGGAAAGCTGTGAAGTTGGCTGAGCAGGATCATAGGTTTATGTTTATGTACCTTCACTCACCGGACCACAATTTTGCAAACGTGTTCTGCAAGGGAACACTCTGTTCTGAGCTTGTGATGCAGTTCCTTGATATGAATTTTGTTTGTTGGGGAGCACTTGCTGATAGAGGAGAGGGTATGCAAATGGTTTCCATGCTGCGCCCTTCTACGTTTCCATGTTGTGCTGTCATCGCTCCAGCTCCCGGTGATAGCATGACAGTGCTGCAGCAGCTTGAGGGGCCTCTTTCAGCAGCTGAGCTAGTGGAGATTCTACAAAGGACAATGGAGGAACAAGGGCTGGCTTTCGGAAGCGGAAAGGCTAAGCACGAATCAAAGATCCTAGCTGACCGCAGGCTTCGAGAAGAGCAAGACGCCGCATATTTTGCAGCTTTGCATATAGACAAGGAAAAAGAGAAGCAGCACAAGAATTCTCCTTTAAGAGGGGGAATTCAGAAGCCAGTGGAGGCTCAGAATGGCAGAAATTTTAGGAAGTTGAGTAACAATTCTGTGAATGTTAGAAAACAGGATAGTAAGAATGAAGTTTACGAGTCTAATGGTCAAAAACAAGCCAAAGGAATTGCAAGCAGGGTAAATGGCTATGGCTCTGAGGCTACACAGATACTGATAAGGTTTCCGAATGGAGAAAGAAGAGAACACAGTTTTTTGTCTACTGACAAAATCCAATCCATCTTCACGTGCATTAATTCATTAGGAATTCCAGGGATTGAGAATTATAGATTAATTTCAAATTTTCCAAGGAAAGCTTATGGTGTGGACCAAATGAGAATGACTCTCAAAGAAGCTGGCTTGTTTCCTAAAGCTAGCCTGTTCTTGGAGCCTATGTGA 1188 0.4503 MSSPATRDHRIVRRVASLPRSIMGEISRALGDGMGLVGIGRRRNHNHNHNHEANVGQGQVQPHGPPLLPQEHIAVPEEWAFLESFEQQYGNNHPFFYACRFRKAVKLAEQDHRFMFMYLHSPDHNFANVFCKGTLCSELVMQFLDMNFVCWGALADRGEGMQMVSMLRPSTFPCCAVIAPAPGDSMTVLQQLEGPLSAAELVEILQRTMEEQGLAFGSGKAKHESKILADRRLREEQDAAYFAALHIDKEKEKQHKNSPLRGGIQKPVEAQNGRNFRKLSNNSVNVRKQDSKNEVYESNGQKQAKGIASRVNGYGSEATQILIRFPNGERREHSFLSTDKIQSIFTCINSLGIPGIENYRLISNFPRKAYGVDQMRMTLKEAGLFPKASLFLEPM 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01858 395 PANTHER UBIQUITIN-ASSOCIATED (UBA) PROTEIN-RELATED 9 394 - -
Aip01g01858 395 Gene3D Glutaredoxin 77 214 - -
Aip01g01858 395 SMART ubx_3 313 394 IPR001012 GO:0005515
Aip01g01858 395 CDD UAS 101 211 - -
Aip01g01858 395 PANTHER FAS-ASSOCIATED PROTEIN 9 394 - -
Aip01g01858 395 ProSiteProfiles UBX domain profile. 314 392 IPR001012 GO:0005515
Aip01g01858 395 CDD UBX 321 393 - -
Aip01g01858 395 SUPERFAMILY Thioredoxin-like 75 214 IPR036249 -
Aip01g01858 395 SMART 45neu3 80 206 IPR006577 -
Aip01g01858 395 Pfam UBX domain 317 393 IPR001012 GO:0005515
Aip01g01858 395 MobiDBLite consensus disorder prediction 252 283 - -
Aip01g01858 395 SUPERFAMILY Ubiquitin-like 314 394 IPR029071 -
Aip01g01858 395 Gene3D - 315 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01858 Aip-Chr1 95122830 95124883 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01858 K18726 - gmx:100775212 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01858 01 95122830 95124883 Aip01g01858 01 95122830 95124883 ECH