Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01856 atggacatgaaaggatatTCAGTTTCCTCGACAACAAATCATAGGAATAAGCCATTTTTTGCAGCTTCCATTCACACAACAAAACAACAACTAACAAGACCCCAAAAGATTCATTCTTTCAAATTGGCTTCTTTTTCTTATTATTATTCTATACCTATGCTATTACCGTCCCTTGTTCTGTTGCTTCTTCTTGTTCCTTCAGTACACTCTAATTCAACTTACCACATTGCCACCAACAACTCTTTTACGCCATTCTTGCGTTTAAAGAGAATAAGACAGCATTTGAGCAAGATCAACAAACCTCCTCTCAAGACAATTCAGAGTCCAGATGGAGACTTGATAGATTGTGTCTTATCTCATCAGCAACCAGCTTTTGACCATCCTAACCTTAAAGGACAAAAACCATTGGAGCCACCAGAGAGGCCAAAGGGATATGAAGAAAACAATGATAATGTAACTGAGAGCTTCTTCCACCAGCTTTGGACTCATTCCGGTGAATCATGTCCTCAAGGAACCATTCCGATCCGAAGAACAACTGAACAGGACATTCTCCGGTCCAGTTCTATCCGGCGATTCGGAAGAAAGCCGAGAGGCGTACGCCGAGACTCAACCGCCTCCGGCCATGAGCATGCAGTTGTGTTTGTGAATGGAGAACAATACTATGGAGCAAAAGCAAGCATAAATGTGTGGGCCCCAATAGTAACTGATCAATATGAATTCAGCTTATCACAAATATGGGTTATTGGTGGATCCTTTGATAATAATCTCAATACCATTGAAGCTGGATGGCAGGTCAGTCCTGAGCTATATGGAGATAATTACCCTAGGTTCTTCACTTATTGGACAACAGATGCATATCAAACAACAGGATGCTACAACTTACTATGTTCAGGATTTGTCCAAACTAACAACAGAATAGCAATAGGGGCTGCAATCAACCCAAGATCAGCTTACAATGGAAGACAATTTGACATTGGAATAATGGTTTGGAAGGACCCCAAGCATGGACATTGGTGGTTGGAATTTGGGTCAGGGCTACTAGTGGGATACTGGCCAGCATTCTTGTTTAGTCACTTGAGAAGCCATGCAAACATGGTTCAATTTGGTGGAGAGATAGTGAACTCAAGATCAAGGGGTTACCACACAGGCACACAAATGGGGAGTGGCCATTTTGCTGAGGAAGGTTTTAGAAAAGCAGCATATTTTAGGAACCTACAAGTTGTTGATTGGGACAACAACTTGCTCCCTCTTTCTAATATTCACCAACTTGCTGATCATTCCAATTGCTATGACATTAGGGAAGGGACAAATCATGTTTGGGGAACTTACTTTTATTATGGAGGTCCTGGAAGGAATGTTAGATGCCCTTGA 1371 0.4121 MDMKGYSVSSTTNHRNKPFFAASIHTTKQQLTRPQKIHSFKLASFSYYYSIPMLLPSLVLLLLLVPSVHSNSTYHIATNNSFTPFLRLKRIRQHLSKINKPPLKTIQSPDGDLIDCVLSHQQPAFDHPNLKGQKPLEPPERPKGYEENNDNVTESFFHQLWTHSGESCPQGTIPIRRTTEQDILRSSSIRRFGRKPRGVRRDSTASGHEHAVVFVNGEQYYGAKASINVWAPIVTDQYEFSLSQIWVIGGSFDNNLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFVQTNNRIAIGAAINPRSAYNGRQFDIGIMVWKDPKHGHWWLEFGSGLLVGYWPAFLFSHLRSHANMVQFGGEIVNSRSRGYHTGTQMGSGHFAEEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIREGTNHVWGTYFYYGGPGRNVRCP 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01856 456 Pfam Neprosin 238 449 IPR004314 -
Aip01g01856 456 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 42 456 - -
Aip01g01856 456 MobiDBLite consensus disorder prediction 124 144 - -
Aip01g01856 456 Gene3D - 232 343 - -
Aip01g01856 456 PANTHER CARBOXYL-TERMINAL PEPTIDASE 42 456 - -
Aip01g01856 456 Pfam Neprosin activation peptide 105 213 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01856 Aip-Chr1 95104454 95108539 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01856 - - gmx:100820129 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01856 01 95104454 95108539 Aip01g01856 01 95104454 95108539 ECH
Aip01g01856 01 95104454 95108539 Aip01g01856 01 95104454 95108539 PCT