Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01847 ATGGAAAATCCACCAAGAAGCATGTTGAGGCATGTTCTTGTGGTTTCTCTGGCTTTGAATGTCAGCTTCATACTCAGAATAATGCTTTACCAAACTCAACAAACTCACCACAAATCTCCTTTTTCTATCTCTTCATCATCATCAACAGCAACAAGAAGGTCATTGGTTAATTCAACTCGTTCGGATCGTCCCCCAGACAAAGAGAGACTCATTAATCTCGACCATGGAGATCCTAGAATGTATGAAAGATATTGGAGAAAGAGAGGTGAGAAAACAAGTATCACAATTGCAGGGTGGGAATCAATGAGCTATTTCTCGCAAGGAGAAAACATTTGTTGGTTCATGGAACCCGAGCTTGCTGAAGAGGTTGTGAGACTTCACAATTTGGTTGGAAATGCAGTGACACAAGGGCGCCATATTGTTGTTGGCACAGGCTCCTCTCAGCTCTTTCTTGCTGCTCTCTATGCTTTGTCTCCCACTCATCATTCTCATCAACCCATTACTGTTGTCTCAGCACTACCCTATTACTCGTCGTACCCATCAATGACAGATTACCAGAAATCGGGGCTATACAAATGGGGTGGAGATGCAGAGACTTATGATGATGAGAAAGATGGTGCCTACATAGAGCTGGTAACTTCACCAAATAACCCTGATGGATACACAAGGGAATCAGTGGTCAAGAACAAGAGGCAGGGATTGTTTATTCATGACCTTGCTTATTATTGGCCTCAGTACACTCCCATTTCATACCCTTCAGATCATGACCTCACCCTTTTCACTCTATCAAAAGCCACTGGTCATTCTGGCACTCGCATAGGATGGGCGCTGGTTAAAGACTCTGTGGTGGCGAAGAAGATGACGAAATTTATAGAGCTAAATACGATAGGTGTGTCTAAGGATTCTCAACTGAGAGCTGCTAAGATTTTGGAGACAGTGTCTGACAGCTGTGAAGAAGAAGAATCATTCTTCAAGTATAGCTATGAAATCATGGCTCATAGATGGAGGAAATTGAGAGCAGCAGTTGAGGGTAATGCCTTATTCACTCTGCCTAACTTTTCTCCTGCTTTCTGCAACTTCTTCAATAACTACACTCAACCTCAACCAGCTTTTTTGTGGTTGAAGTGCGAGCGGTTAATAGAGGATTGCGCAAGCTTCCTTAGACAACACAAGATCTTATCAAGAAGTGGGGAGCGTTTTGGGGTTAGCCCAAAATACGTTAGAATTAGCATGCTTGATACAGATGAAAATTTCATGGAGTTTATAGAAAGGTTATCTTCTATACACCTGTAA 1293 0.4238 MENPPRSMLRHVLVVSLALNVSFILRIMLYQTQQTHHKSPFSISSSSSTATRRSLVNSTRSDRPPDKERLINLDHGDPRMYERYWRKRGEKTSITIAGWESMSYFSQGENICWFMEPELAEEVVRLHNLVGNAVTQGRHIVVGTGSSQLFLAALYALSPTHHSHQPITVVSALPYYSSYPSMTDYQKSGLYKWGGDAETYDDEKDGAYIELVTSPNNPDGYTRESVVKNKRQGLFIHDLAYYWPQYTPISYPSDHDLTLFTLSKATGHSGTRIGWALVKDSVVAKKMTKFIELNTIGVSKDSQLRAAKILETVSDSCEEEESFFKYSYEIMAHRWRKLRAAVEGNALFTLPNFSPAFCNFFNNYTQPQPAFLWLKCERLIEDCASFLRQHKILSRSGERFGVSPKYVRISMLDTDENFMEFIERLSSIHL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01847 430 MobiDBLite consensus disorder prediction 39 73 - -
Aip01g01847 430 Gene3D - 61 111 IPR037029 GO:0016846
Aip01g01847 430 MobiDBLite consensus disorder prediction 39 58 - -
Aip01g01847 430 MobiDBLite consensus disorder prediction 59 73 - -
Aip01g01847 430 Pfam Allinase 71 428 IPR006948 GO:0016846
Aip01g01847 430 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 4 429 - -
Aip01g01847 430 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 4 429 - -
Aip01g01847 430 CDD AAT_like 117 425 - -
Aip01g01847 430 SUPERFAMILY PLP-dependent transferases 67 427 IPR015424 -
Aip01g01847 430 Gene3D Aspartate Aminotransferase, domain 1 322 429 IPR015422 GO:0003824
Aip01g01847 430 Gene3D - 116 321 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01847 Aip-Chr1 92718264 92728384 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01847 K16903 - gmx:100818522 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01847 01 92718264 92728384 Aip01g01847 01 92718264 92728384 ECH
Aip01g01847 01 92718264 92728384 Aip01g01847 01 92718264 92728384 PCT