Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01832 ATGTGGACGCTGCTTTACCCGCCCCAAACACAAACACTCCTCCGCCCTACAATTATCACAAGAAAAAGAGCAGAAATCGCCACTCTCCCCATATCAGTGAAATGCCAACAAGAAGAAACCTCCCTCCGACCAAAAACCCAAGACGACGGCATCCCTGCGGAAGACGTCAATTTCCTCGCAAAATTCAAATCCCGCCACAACTACATCCGCGTTCTAGAAGTTTCTAGAAAAGCCAATCACCCTTTCCGCGGCTCCAGGCTCCTCCTCCTCGACGGCCCCGGCAACATCCACAGCATCACATTCCCCAACACGCCATTCACCAACACCTACTTCGACGTCTTCGCCACCCTCCCTCCCATCCTCCCTCCTGGCCCCATCTCCATCCTCGGCTTCGGCGCTGGCTCCGCCGCCCGCGCTCTCCTCGACCTCTATCCCGACGTCATCCTCCACGGCTGGGAGCTCGATCAGTCCGTCATCGACGTCGCCAGGGAGTTCTTCAGCCTCCGGCGGATCGAGCGGAAAAACAAGGACAGGCTCTTTATCTACGTCGGGAACGCGCTGAACGCGAGCGTGAAGGACGGGTTCGCGGGGATTATAGTGGACCTGTTCGCGAAGGGGTGCGTTATATCGGAGCTCCAGGATGAGGCCACATGGAGGAAGATGAAGGGGTTGCTGAGGGAGGGTGGGAGGGTGATGGTGAACGTTGGTGGAAGCTGTGTTGAGGCTGAGAGTAAGGTGAGGGATGGGAAGGTGGTGATGGAAGAGACTCTGAAGGCGATGAAGGTGGTGTTTGGGGAGAAGCTTTTTGTCCTCAGTTTGGGGAACAGAAGGGATGATAGCTCCGTTGCCGTCACCGGAGACTGGCCTGACGGTGATGCTTGGAAGAAGGGCCTTCCGGATCGTCTCCGATATTATGTTGATTTGTGGAAGCCATATTCTGGTGAGAAAGGTAGATAA 957 0.558 MWTLLYPPQTQTLLRPTIITRKRAEIATLPISVKCQQEETSLRPKTQDDGIPAEDVNFLAKFKSRHNYIRVLEVSRKANHPFRGSRLLLLDGPGNIHSITFPNTPFTNTYFDVFATLPPILPPGPISILGFGAGSAARALLDLYPDVILHGWELDQSVIDVAREFFSLRRIERKNKDRLFIYVGNALNASVKDGFAGIIVDLFAKGCVISELQDEATWRKMKGLLREGGRVMVNVGGSCVEAESKVRDGKVVMEETLKAMKVVFGEKLFVLSLGNRRDDSSVAVTGDWPDGDAWKKGLPDRLRYYVDLWKPYSGEKGR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01832 318 Pfam Spermine/spermidine synthase domain 152 256 - -
Aip01g01832 318 Gene3D Vaccinia Virus protein VP39 63 292 IPR029063 -
Aip01g01832 318 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 20 311 - -
Aip01g01832 318 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 20 311 - -
Aip01g01832 318 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 58 240 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01832 Aip-Chr1 91160104 91161136 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01832 - - mtr:MTR_4g105140 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01832 01 91160104 91161136 Aip01g01832 01 91160104 91161136 ECH