Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01730 ATGTGTTCATGGCCCGACAAAGATGTGAAGGTTGAAGAAGAAGAGAACGTTGCACTACCAATCACGAAGCTCCTCAACCTCACTGATCTTCAGCGCATCGATCCGTTCGTCGAGGAAATCCTCATCACCGCTGCACACGTCACCTTCTACGAGTTCAACATCGACCTCTCCCAATGGATTCGTTCCTTTATAATCTCCTTCGTTTCATCTATTCCATTCTCTATCTCTCTCTATCTAACGCTTTCTCTCTCTTCTTTCTGCGATTACCGTTTGCAGAGTCGCAAGGACGTCCAGGGATCCCTCTTCGTTGTCAAAAGAAATAAAAAGCATAGCTTGGATCTACTAAGTCATCAAGAACAGATGAAAAGATTCGGACATCACCTTAAACTATTGTTCAATGATAAGAAACCATCACAATCTCAGACAAAACAACTCTGCAGAGGTTTCTGTCAGGGGACTAAGTTTGTTTCTCCAAACCAAGATGATTTTGCTGTGATTTCACCAAGAATTAAACTCAGAGATGGGAGGCACCTGGCTTATCTTGAGAGAGGGGTTTCTAAGGATGTGGCAAAGTATAAGATCATCATTGTCCATGGTTTTGGAAGCTCCAAAGAGATGAACTTTCTCGCACCCCAAGAACTAATAGATGAACTAGGCATATATCTACTGCAATATGACCGAGCTGGGTATGGAGAAAGTGATCCAAATCCCAAACACTCGCTCAAAAGTGAAGCACTTGACATTCAAGAACTTGCTGATCAGTTAGAGTTAGGGCCACAGTTCTATGTGAGAGAGTTAAGCATAGAGTGCGCTCGAGTTGGCGGAGTGGAGATTCCGAACAACAAGAGAATTGAGTTCTCGCTACAGTACATCCATGGAATCGGAAGGAGCAGAGCTCGCAAGATTCTCTGCGATATAAGCATGGACAACAAGGTCACTAAGGATCTCAGCGAAGAGGATCTCATCACTCTTAGAGATGAAGTCTCCAAATACGTCATTGAAGGCGATTTGAGGAGGTTTAATGCGCTGAATATAAGGAGATTGAAGGAGATTCAATGTTACAGAGGATAG 1071 0.4342 MCSWPDKDVKVEEEENVALPITKLLNLTDLQRIDPFVEEILITAAHVTFYEFNIDLSQWIRSFIISFVSSIPFSISLYLTLSLSSFCDYRLQSRKDVQGSLFVVKRNKKHSLDLLSHQEQMKRFGHHLKLLFNDKKPSQSQTKQLCRGFCQGTKFVSPNQDDFAVISPRIKLRDGRHLAYLERGVSKDVAKYKIIIVHGFGSSKEMNFLAPQELIDELGIYLLQYDRAGYGESDPNPKHSLKSEALDIQELADQLELGPQFYVRELSIECARVGGVEIPNNKRIEFSLQYIHGIGRSRARKILCDISMDNKVTKDLSEEDLITLRDEVSKYVIEGDLRRFNALNIRRLKEIQCYRG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01730 356 Gene3D - 271 335 - -
Aip01g01730 356 SUPERFAMILY PH domain-like 25 120 - -
Aip01g01730 356 Gene3D 30s ribosomal protein s13, domain 2 336 356 IPR027437 -
Aip01g01730 356 ProSiteProfiles Ribosomal protein S13 family profile. 273 356 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aip01g01730 356 Pfam Ribosomal protein S13/S18 272 356 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aip01g01730 356 SUPERFAMILY alpha/beta-Hydrolases 165 259 IPR029058 -
Aip01g01730 356 Pfam Dcp1-like decapping family 23 61 IPR010334 GO:0000290|GO:0008047|GO:0043085
Aip01g01730 356 Gene3D - 16 68 IPR011993 -
Aip01g01730 356 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 121 268 - -
Aip01g01730 356 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 121 268 - -
Aip01g01730 356 Gene3D alpha/beta hydrolase 166 263 IPR029058 -
Aip01g01730 356 SUPERFAMILY S13-like H2TH domain 271 356 IPR010979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01730 Aip-Chr1 71563382 71568548 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01730 K02952 - aip:107613750 284.648