Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01726 ATGAGAAGGCCACAGCATCATCCACTAAGATGTTGTATGCAGAAAAACCGCACCGACAAAAACATCCACCACCACCCCCCCATGGGAGGGTTACCAGACGATCTCGTCATCTTCATCCTTTCTAAACTTAGTTCCTCGGTTTCTTCTCCTTCGGATTTCATCAACGTTCTCTTGACATGCAAAAGATTGAACCGGTTAGCTCTCGATCGACTCGTGTTATCGAAACTCGGCGCCAGGGCCTTCGCTGTGAAACCAAAAAACTGGTCAGATTCCACTGACCGCTTCCTCCGCCGCTGCGTTACCGCCGGCAACGTCGAAGCCTGCTACACTCTCGGAATGTTCAATGGCAGCGGCGCCTCAAAGAATGACAAGGATCTCCGCGCCGGCGTGGCGCTATGCACGCGTGCTTCGCTCCTCGGCCACATCGACTCGCTCCGGGAGTTAGGCTACTGCCTCCAAGACGGTTACGGTGCGCGGAAGAACGTGGCCGAGGGGCGTCGGTTGCTCGTGGAAGCCCACGCGCGTGAGCTAGCGTTAGTCATACGCGAGGTCACTCGGTCCACCACCCCCTCAAACTCCTCTATGCTGACGTGGCTAACTCGACGGTTACGCAATCTTGCGTGCCATTCAGGGTCGTTTCTTCCGTTACTGGAGGGTTACGGTGGTTACAGCGTAGCTGTTCAACCGGTGAATTGGTTTATGAGGGAGTGGTTTGAGTCCGGTAGAGGGAGGTTGGGTGAGGGGCTGAGGTTGTGCGCGCACGTTGGCTGCGGGCGGCCGGAGACGCGGCCGCATGAGTTCCGGCGCTGTTCGGTTTGCGGGAAGGTGAACTACTGCTCACGGGGGTGCCAGGCGCTTGATTGGAAGCTGCGGCACAAGACGGAGTGCTCCGAGTTTTTACCGTGGGTGGTGGTTGTAGAAAACGACGGTGTTGGTGGGGTTGCTGCAGTTGTTGGCGGAGGTAACGGTGACGTAGTGGCCTAG 984 0.5722 MRRPQHHPLRCCMQKNRTDKNIHHHPPMGGLPDDLVIFILSKLSSSVSSPSDFINVLLTCKRLNRLALDRLVLSKLGARAFAVKPKNWSDSTDRFLRRCVTAGNVEACYTLGMFNGSGASKNDKDLRAGVALCTRASLLGHIDSLRELGYCLQDGYGARKNVAEGRRLLVEAHARELALVIREVTRSTTPSNSSMLTWLTRRLRNLACHSGSFLPLLEGYGGYSVAVQPVNWFMREWFESGRGRLGEGLRLCAHVGCGRPETRPHEFRRCSVCGKVNYCSRGCQALDWKLRHKTECSEFLPWVVVVENDGVGGVAAVVGGGNGDVVA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01726 327 SUPERFAMILY HCP-like 95 172 - -
Aip01g01726 327 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 114 315 - -
Aip01g01726 327 PANTHER MYND DOMAIN-CONTAINING 14 113 IPR044508 -
Aip01g01726 327 Gene3D - 244 299 - -
Aip01g01726 327 Pfam MYND finger 257 296 IPR002893 -
Aip01g01726 327 SUPERFAMILY HIT/MYND zinc finger-like 250 301 - -
Aip01g01726 327 Gene3D Tetratricopeptide repeat domain 78 181 IPR011990 GO:0005515
Aip01g01726 327 PANTHER MYND DOMAIN-CONTAINING 114 315 IPR044508 -
Aip01g01726 327 ProSiteProfiles Zinc finger MYND-type profile. 254 296 IPR002893 -
Aip01g01726 327 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 14 113 - -
Aip01g01726 327 SUPERFAMILY F-box domain 22 89 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01726 Aip-Chr1 70830569 70832246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01726 - - adu:107463542 362.459