Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01715 ATGGTTATGGATACGAATCGCTCATCTGGTGCTTCTTCATTTCTCTCCGATCTTCCCTCTCGAGGCCTCTTCTCTTCCACCGTTGTGTCTTCCAATCCGGGTGGGATGCGGGTGTACGTATGCGATCATGAAACAATGCCACCAGAGGGCCAGCATATTAAGACAAACCAACAAAACATACTTATTAGAGCACTCACCCTAGGCCTGAAGAAACAAAAATGTGATTCCAGCTCAAAGGATGGAACCGAGGGATCTAGAAAGAGGGCTAGTGACAAGGGTTTGGATGGCAGAGCTTCAGCTAAGAGAGCAAATAATCAAATAAACTCTTTACAAGAGGGATCAACCAGTCAAACATTCAATAAGGATTTCCACAGGTTGACTGTAGAGAGGCTTCGTAATCTTTTGAAATCTAAAGGTCTTTCAACCAAAGGAAAGAAGGAGGAGCTTATTGCACGTCTTAAAGATGCAACTGATTCGTGA 480 0.4396 MVMDTNRSSGASSFLSDLPSRGLFSSTVVSSNPGGMRVYVCDHETMPPEGQHIKTNQQNILIRALTLGLKKQKCDSSSKDGTEGSRKRASDKGLDGRASAKRANNQINSLQEGSTSQTFNKDFHRLTVERLRNLLKSKGLSTKGKKEELIARLKDATDS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01715 159 Pfam SAP domain 125 156 IPR003034 -
Aip01g01715 159 MobiDBLite consensus disorder prediction 71 121 - -
Aip01g01715 159 MobiDBLite consensus disorder prediction 101 121 - -
Aip01g01715 159 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 5 156 - -
Aip01g01715 159 MobiDBLite consensus disorder prediction 73 98 - -
Aip01g01715 159 SUPERFAMILY SAP domain 120 156 IPR036361 -
Aip01g01715 159 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 5 156 IPR033575 GO:0032434
Aip01g01715 159 Pfam Det1 complexing ubiquitin ligase 13 67 IPR018276 -
Aip01g01715 159 ProSiteProfiles SAP motif profile. 123 157 IPR003034 -
Aip01g01715 159 Gene3D SAP domain 120 159 IPR036361 -
Aip01g01715 159 SMART sap_9 123 157 IPR003034 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01715 - - gmx:100306690 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01715 01 70255441 70260007 Aip01g01715 01 70255441 70260007 ECH