Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01709 ATGGCGGATCCGATGCCGGCGCCACCAAGATCTGCCACGGACCTTTTCTCGGATCCGCTGGACTCCCGCCCTCTGTGGTTCAAACCGGCGTCGTTTCTTTCTCCTGACTTCGACTCCGAATCCTACATCTCTGAGCTGCGAACCTTCGTCCCCTTCGACACGCTACGCTCAGAGCTGAACAGCTACCTCTCCTCCCTCAACCACGAGCTCATCGATCTCATCAACCGCGACTATGCTGACTTTGTTAACCTCAGTACCAAGCTCGTCGACGTTGACGCTGCCGTCGTTCGCATGCGTGCGCCGCTCGTTGAGCTCCGTGAGAAGATCGAGCAGTTCAGGGGATCCGTTGAGGTGTCCCTTGTCGCCATCAAGAACGGTTTGAAGCAGAGATCTGAGGCTGCCGCTGCTAGAGAGACTCTCGAGCTTCTTCTTGACACGTTTCACGTTGTTTCTAAGGTTGAAAAGCTGATAAAGGAGCTGCCTAGTGTACCCACTGATTGGTCGAATGGGGATGGAAGTTTGACAGACAAGAATTCCCTGAGCAATGGAGTTTCTGTGCAGCATGTTGAGAATGGAACAAGTGTTAGAGAGACCCAAAGCATGCTATTGGAGAGAATTGCTAGCGAGATGAACAGGCTAAAATTCTATGTTACACATGCAAAGAACCTGCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGCCAAATAGTGGATGCAAGCTTGGGACATTGCTTTGCCGATGGTCTAGAGCACCGGGATGCAACTGCAATCTACAATTGCTTACGTGCATATGCTGCTATTGATAACACCAAGAATGCAGAAGAACTCTTTCGAACCACTATTGTGGCTCCGTTGATACAGAAGATTATACCACACGGGCCATCAGCTTTGGCTGCAGGATCATCCGGAGATGAGCTCGATAATGATTATCAGCAAATTAAGGAGTGCATTGTTAAGGACTGTAAATTTTTATTGGACATTTCTTCAGCTGAAAATTCAGGTTTGCATGTCTTTGACTTTTTAGCCAATTCAATCCTCAAGGAGGTTCTCTCTTCCATTCAGAAGGGAAAACCAAGTGCATTTTCTCCTGGAAAACCAGCAGAATTCTTGAAGAATTACAAAGCAAGCTTAGACTTCTTGGCTTATCTAGAAGGTAGCTACTGTCCGTCCAGATCTGCTGTTGCTAAATTTCGATCTGAAGCAATTTATATAGAGTTCATGAAGCAATGGAATATTGGAGTTTATTTCTCTCTGAGGTTTCAGGAAATAGCAAAGTCTTTAGATGATGTGCTTTCAACATCCAGTCTTGTCCCTTTGCAAGACACAGTCTCTGGCAAAGAAAGTCGAGTTTTAACATTAAAACAAAGTGTTACACTGTTGGAGAGTATGAGATCATGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGCTCTGACAAGTTCCTACGCCTATCCTTGCAGCTTCTGTCCAGATACTCAAATTGGCTGTCGTCTGGACTGAATGCCCGCAAGAGCCATAGCACAAACACCAACACTGGGTTTCAATGGGCTGTTTCTGCTGCTATAGATGACTTTATTTATGTAATTCATGATATAAGGTATCTGGAAGAGCATGTTCGTGGAGATTACCTGGAGCACGTGCTTCAGCTCCTATCTTCATGCTCCCCTGATGTTCTTGAATCAGTAAGGCAGAGCATTTTACAAGGTGGTCAATCATTGAAATCTATAGAACCTTTAGTCACCAAAGCAGTAGTGGAGTCACTAGTGGAAAAGTCAGTTGAGGACTTGAGACAGATGAAGGGGATAACAGCAACCTACAGGATGACTAATAAACCTCTACCCGTGAAGCATTCACCCTATGTTGCAGGTGTATTACGTCCCCTAAAGGCTTTTTTGGATGGAGAGCGAGCTACAAGATATTTGACAAAATTTTCTCTGCAGAAAATTAGGCAGAGTGCACAAAGACGAGCTGGAGCAAGTTCAGATGTCTCAGATAACAATGTGTCTGACACCGGCAAAATTTGCATGCAGCTGTTCCTTGATATTCAGGAATATGCCAGTAACCTCTCCGCATTAGGGGTTGAAGCAGTCAAGATTGCATCCTACCGTTCATTATGGCAGTGTGTGGCTCCTGCTGATGAGCAAAATACAATTTAA 2163 0.4512 MADPMPAPPRSATDLFSDPLDSRPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNSYLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLVELREKIEQFRGSVEVSLVAIKNGLKQRSEAAAARETLELLLDTFHVVSKVEKLIKELPSVPTDWSNGDGSLTDKNSLSNGVSVQHVENGTSVRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASQIVDASLGHCFADGLEHRDATAIYNCLRAYAAIDNTKNAEELFRTTIVAPLIQKIIPHGPSALAAGSSGDELDNDYQQIKECIVKDCKFLLDISSAENSGLHVFDFLANSILKEVLSSIQKGKPSAFSPGKPAEFLKNYKASLDFLAYLEGSYCPSRSAVAKFRSEAIYIEFMKQWNIGVYFSLRFQEIAKSLDDVLSTSSLVPLQDTVSGKESRVLTLKQSVTLLESMRSCWREDVLVLSCSDKFLRLSLQLLSRYSNWLSSGLNARKSHSTNTNTGFQWAVSAAIDDFIYVIHDIRYLEEHVRGDYLEHVLQLLSSCSPDVLESVRQSILQGGQSLKSIEPLVTKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVKHSPYVAGVLRPLKAFLDGERATRYLTKFSLQKIRQSAQRRAGASSDVSDNNVSDTGKICMQLFLDIQEYASNLSALGVEAVKIASYRSLWQCVAPADEQNTI 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01709 720 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 7 645 IPR009316 GO:0007030|GO:0015031|GO:0016020
Aip01g01709 720 PANTHER BNAA01G14200D PROTEIN 644 720 - -
Aip01g01709 720 PANTHER BNAA01G14200D PROTEIN 7 645 - -
Aip01g01709 720 Pfam COG (conserved oligomeric Golgi) complex component, COG2 25 156 IPR024602 -
Aip01g01709 720 Pfam COG complex component, COG2, C-terminal 589 636 IPR024603 -
Aip01g01709 720 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 644 720 IPR009316 GO:0007030|GO:0015031|GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01709 K20289 - gmx:100817096 1179.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01709 01 69762452 69767032 Aip01g01709 01 69762452 69767032 ECH