Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01680 ATGATCAGTGTCATGTTCTTTGAATGTTCAAATAACAGGAACGAAGAAGATGAGCAGAGGACTGAAGAGGCGAAGAATGAAGAAGATGAGCAGAGGACCGAAGAGGCGAAGAACGAAGAAGATGAGCAGAGGAAGTTCAGAGAAGATGAAGACCACGAGTCACTCACCTGGGTTCGATGGAGGGCTACTGGTGTTGAGGACCAGGCGACGATGAAGACGATGAGAGGGCTACTGGCGACGGCGGTGGCGCTGACGACCTCAGACTGCGGCGACGATGGAGGGCTACTGGGCGACGATGGAGAGGAACTTCAGAGGGCTAGGGCTGATTTTGAAGATGCACTCTCACCAAGCTGGGAGAATCTTATGAGGGGTCAAGTGAACTTGAAGGATGCAGTGGCTGGGACTATAACCTTCAACGACAAAGCCAGGAACAAGGTTTACAAGCTCAACGATCAGACAGCTAAGCTTTTTGTCAGACCAAGAGGTTGGCACCTACCGGAGGCCCATATTTTCATTGATGGTGAACCAGCAACCGGTTGCCTTGTTGATTTCGGTCTCTACTTCTACCACAATCATGCACCGTTCCGCCAGACTCAGGGTGCAGGCTTTGGCCCTTTCTTCTATCTTCCAAAAATGGAGCACTCAAGGGAAGCTAAGATATGGAACAATGTGTTTGAGAGGGCAGAGAAGATGGCAGGCATAGAAAGGGGAAGCATACGGGCCACTGTTCTGATTGAAACACTTCCTGCTGTGTTTCAAATGAACGAAATTCTGTATGAGCTGAGGGACCACTCCGTTGGTCTCAACTGTGGCCGTTGGGATTACATTTTCAGTTATGTCAAGACCTTCCAAGCTCACCCGGATCGGCTGCTCCCGGACAGGGTTCTTGTTGGCATGACTCAGCACTTCATGAAGAGCTACTCTGATCTTCTCATCCGGACGTGTCATAGGCGTGGCGTGCATGCTATGGGAGGCATGGCAGCTCAAATTCCAATTAGAGATGATCCAGCTGCTAATGAGGCAGCACTGGAACTGGTAAGGAAGGACAAACTAAGAGAAGTAAAGGCAGGGCATGACGGAACATGGGCAGCACACCCCGGTCTGATCCCAACCTGCATGGAGGTTTTTAACAACAACATGGGCAATGCTCCTAACCAGATCAAGGCCGCGAAGCGCAATGATGCTGCAAGCATAACTGAAGAAGACCTCTTGCAAATACCTAGAGGTGTACGTACAATTGATGGTCTCCGCTTGAATACACGTGTCGGTATTCAGTATGTGGCGGCATGGCTCACGGGATCTGGTTCAGTTCCTCTTTACAACCTCATGGAAGATGCTGCCACTGCTGAGATTAGCAGGGTGCAGAACTGGCAGTGGATTAAGTATGGAGTGGAGTTGAATGGGGATGGACTCGGAGTAAGAGTGAGCAAGGAGCTCTTCAGCCGGGTGGTTGAGGAAGAGATGGCTAGGATTGAAAGTGAGGTGGGAAAAGATAAGTTCAAGAAGGGAATGTACAAGGAGGCTTGCAAGATCTTCAAAAGGCAGTGCACTGCTCCAACGCTGGATGATTTTCTGACCCTGGATGCCTACAATTACATAGTCATACATCACCCCAAGGGACCAGCAAAGCTTTGA 1635 0.4991 MISVMFFECSNNRNEEDEQRTEEAKNEEDEQRTEEAKNEEDEQRKFREDEDHESLTWVRWRATGVEDQATMKTMRGLLATAVALTTSDCGDDGGLLGDDGEELQRARADFEDALSPSWENLMRGQVNLKDAVAGTITFNDKARNKVYKLNDQTAKLFVRPRGWHLPEAHIFIDGEPATGCLVDFGLYFYHNHAPFRQTQGAGFGPFFYLPKMEHSREAKIWNNVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDYIFSYVKTFQAHPDRLLPDRVLVGMTQHFMKSYSDLLIRTCHRRGVHAMGGMAAQIPIRDDPAANEAALELVRKDKLREVKAGHDGTWAAHPGLIPTCMEVFNNNMGNAPNQIKAAKRNDAASITEEDLLQIPRGVRTIDGLRLNTRVGIQYVAAWLTGSGSVPLYNLMEDAATAEISRVQNWQWIKYGVELNGDGLGVRVSKELFSRVVEEEMARIESEVGKDKFKKGMYKEACKIFKRQCTAPTLDDFLTLDAYNYIVIHHPKGPAKL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01680 544 CDD malate_synt_A 108 534 IPR006252 GO:0004474|GO:0006097
Aip01g01680 544 ProSitePatterns Malate synthase signature. 262 277 IPR019830 GO:0004474|GO:0006097
Aip01g01680 544 PANTHER MALATE SYNTHASE 107 544 IPR006252 GO:0004474|GO:0006097
Aip01g01680 544 SUPERFAMILY Malate synthase G 106 535 IPR011076 GO:0003824
Aip01g01680 544 PANTHER MALATE SYNTHASE 107 544 - -
Aip01g01680 544 Coils Coil 7 44 - -
Aip01g01680 544 MobiDBLite consensus disorder prediction 1 50 - -
Aip01g01680 544 MobiDBLite consensus disorder prediction 11 50 - -
Aip01g01680 544 Pfam Malate synthase 108 534 IPR001465 GO:0004474|GO:0006097
Aip01g01680 544 Gene3D Malate synthase, domain 3 11 409 IPR046363 -
Aip01g01680 544 TIGRFAM malate_syn_A: malate synthase A 108 533 IPR006252 GO:0004474|GO:0006097
Aip01g01680 544 Gene3D Malate synthase, domain III 410 534 IPR044856 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01680 K01638 - gmx:732628 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01680 01 66788544 66792594 Aip01g01680 01 66788544 66792594 ECH