Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01648 ATGGCTTCTTCTAGATCTTTTTCTTCTTTGCCAATTTTCGTCGTTCTAACAATAACCACCATATGCATGATTTCAAGTACTTCTGCCACAACAACAAGACTCTTCAAGAAGATCTATGCATTTGGGGACTCATTCACGGACACCGGCAACACCAAGAATGCCAATGGCCCAAGCGGATTCGGCCACGTGTCGAACGCGCCGTACGGCAGCACCTTCTTCAACCATTCCACAAACAGATACAGCGATGGAAGACTTGTCATAGATTTTGTAACTGAATCACTCTCAATGCCGTATTTGCCGCCTTACAAGCACTTGAAGAAGGGTAAAAATGACACTTTTGGTGTTAACTTTGCTGTTGCTGGTTCCACAGCAATAAACCATGCATTCTTTGTGAGGAACAATCTTTCTCTTGATGTTACCCCTCAATCTATACAATCACAGCTTATTTGGTTTAACAGATACCTTAATGAGAGCCAAGGATGTGAAGGAGTAGAATCAGGGTGCACTGATTTCAATGAGACACTATTTTGGTTTGGTGAGATTGGAGTGAATGACTATGCTTACACTCTTGGATCCAATATTCCTGATGATACCATAAGGAAGCTAGCAATCAGTAGTACCACTGGAGTTTTGCAGAGTCTGCTTGAGAAGGGTGCCAAGTACATTGTTGTGCAGGGTCTGCCACTCACTGGTTGCTTGCCACTGGCAATGTACCTCGCTTCGCCGGACAACAGGGACGACATAGGATGTGTCAAAAGCGCTAACAACCAGAGCTACAACCACAACCTTGTGCTGCAAGAAAAGATTCAAGAGTTGAGAAAACAGTACCCTGAATCCATCATAGTTTATGCCGATTACTGGAACGCGTACCGCGCCGTAATGAAGAACCCAAGCAAGTATGGTTTCACAGAAGTTTTCAAAGTGTGTTGTGGATATGGAGAACCACCTTACAACTTCAGTGTTTATGCCACGTGTGGAACACCAAATGCCACTGCATGCATTAGCCCTTCACATTACATTAATTGGGATGGTGTTCATTTAACTGAGGCAATGTATAAGGTTGTTTCTGAAATGTTTCTCCAGGGGAATTTAACACAACCTCCATTCAATTTTTTGTTGGAAAAAAAAGAGAAGCAGGGGTGA 1143 0.4322 MASSRSFSSLPIFVVLTITTICMISSTSATTTRLFKKIYAFGDSFTDTGNTKNANGPSGFGHVSNAPYGSTFFNHSTNRYSDGRLVIDFVTESLSMPYLPPYKHLKKGKNDTFGVNFAVAGSTAINHAFFVRNNLSLDVTPQSIQSQLIWFNRYLNESQGCEGVESGCTDFNETLFWFGEIGVNDYAYTLGSNIPDDTIRKLAISSTTGVLQSLLEKGAKYIVVQGLPLTGCLPLAMYLASPDNRDDIGCVKSANNQSYNHNLVLQEKIQELRKQYPESIIVYADYWNAYRAVMKNPSKYGFTEVFKVCCGYGEPPYNFSVYATCGTPNATACISPSHYINWDGVHLTEAMYKVVSEMFLQGNLTQPPFNFLLEKKEKQG 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01648 380 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 14 377 - -
Aip01g01648 380 CDD SGNH_plant_lipase_like 38 363 IPR035669 -
Aip01g01648 380 Pfam GDSL-like Lipase/Acylhydrolase 38 357 IPR001087 GO:0016788
Aip01g01648 380 SUPERFAMILY SGNH hydrolase 36 360 - -
Aip01g01648 380 Gene3D SGNH hydrolase 25 363 IPR036514 -
Aip01g01648 380 PANTHER LIPASE/HYDROLASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 14 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01648 Aip-Chr1 62488542 62492359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01648 25 362 Acyl Lipid Metabolism Gene Families AT4G10950 26.225 9.33e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01648 - - lja:Lj4g3v1389220.1 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01648 01 62488542 62492359 Aip01g01648 01 62488542 62492359 ECH