Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01626 ATGAAGAAGCTCTTGTGTGTTATTCTATCCCTCGCTTTAGTCCTAGGATTCTCCGAGAGCTTCGAGTTCCAGGAGAGAGAACTCGAATCGGAGGAATCCCTATGGGACTTGTACGAGAGGTGGCGGAGCCACCACACGGTTTCTAGAAGCCTCGATGATAAGAAGAAACGTTTCGAGGTGTTCAAGGCGAACGTGATGCATGTCCATGAAACAAACAAGTTGGACAAGCCTTACAAGTTGAAGCTGAACAAATTTGCTGACTTGACCAACCATGAGTTCAGAACCATCTATGCTGCCTCCAAGGTGGGACATCATAGAATGTTCCGCGGCATGCCACGTGGCAATGGGACCTTCATGTATGAGAATGTTGAGAGGGTTCCTGCTTCTGTGGATTGGAGGAAGAAAGGTGCTGTCACTCCTGTGAAAGATCAAGGCCAATGCGGTAGCTGCTGGGCATTTTCAACAGTGGTAGCAGTTGAAGGCATCAACCAAATAAAGACACGTAACCTAGTATCCTTATCCGAGCAAGAACTCATAGATTGTGACACAAACCAAAATCAAGGATGCAATGGTGGCCTTATGGATTATGCCTTCGAGTTCATCAAACAAAAGGGTGGCATTACAACCGAAACTGATTACCCTTACACTGCACAAGATGGCACCTGCGATGCATCCAAGGCGAAGAAGGATGTAGTGTCAATTGATGGACATGAGAATGTTCCAACGAACAATGAGGCGGCATTGCTTAAGGCTGTTGCCAACCAACCTGTGTCTGTTGCCATTGAAGCCTCGGGATCTGACTTTCAATTTTACTCTGAGGGAGTATTTAATGGGGCATGTGGTACTAACCTAGACCATGGGGTTGCAATTGTTGGGTATGGAACAACAAAAGACGGATACAAATATTGGATAGTGAAAAATTCATGGGGACCAGAATGGGGAGAACATGGCTACATTAGGATGCAAAGGGGCATATCCCACAAGCATGGTCAATGTGGCATTGCAATAGAGGCTTCCTACCCTATCAAAACCTCATCTACTAACCCTTTACCATCGTCTCTTAACGACGAGCTTTAA 1077 0.4596 MKKLLCVILSLALVLGFSESFEFQERELESEESLWDLYERWRSHHTVSRSLDDKKKRFEVFKANVMHVHETNKLDKPYKLKLNKFADLTNHEFRTIYAASKVGHHRMFRGMPRGNGTFMYENVERVPASVDWRKKGAVTPVKDQGQCGSCWAFSTVVAVEGINQIKTRNLVSLSEQELIDCDTNQNQGCNGGLMDYAFEFIKQKGGITTETDYPYTAQDGTCDASKAKKDVVSIDGHENVPTNNEAALLKAVANQPVSVAIEASGSDFQFYSEGVFNGACGTNLDHGVAIVGYGTTKDGYKYWIVKNSWGPEWGEHGYIRMQRGISHKHGQCGIAIEASYPIKTSSTNPLPSSLNDEL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01626 358 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 144 155 IPR000169 -
Aip01g01626 358 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 18 348 - -
Aip01g01626 358 SUPERFAMILY Cysteine proteinases 33 342 IPR038765 -
Aip01g01626 358 PANTHER KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1 18 348 - -
Aip01g01626 358 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 284 294 IPR025660 -
Aip01g01626 358 Pfam Cathepsin propeptide inhibitor domain (I29) 38 93 IPR013201 -
Aip01g01626 358 SMART pept_c1 126 342 IPR000668 GO:0006508|GO:0008234
Aip01g01626 358 CDD Peptidase_C1A 127 341 IPR039417 -
Aip01g01626 358 SMART Inhibitor_I29_2 38 93 IPR013201 -
Aip01g01626 358 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 302 321 IPR025661 -
Aip01g01626 358 PRINTS Papain cysteine protease (C1) family signature 144 159 IPR000668 GO:0006508|GO:0008234
Aip01g01626 358 PRINTS Papain cysteine protease (C1) family signature 286 296 IPR000668 GO:0006508|GO:0008234
Aip01g01626 358 PRINTS Papain cysteine protease (C1) family signature 302 308 IPR000668 GO:0006508|GO:0008234
Aip01g01626 358 Gene3D Cysteine proteinases 13 344 - -
Aip01g01626 358 Pfam Papain family cysteine protease 126 342 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01626 Aip-Chr1 60909802 60914623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01626 K16292 - twl:119986318 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01626 01 60909802 60914623 Aip01g01626 01 60909802 60914623 ECH
Aip01g01626 01 60909802 60914623 Aip01g01626 01 60909802 60914623 PCT