Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01618 ATGAATCCAAAGTCCAAACTAAACTTGATATTGCACAAAGTACAGCAATATTGGTCTGGGAATGCCGTAAATCAAAACAAAGGGATGGTGGAGAATTTGCAGCGTTATGGAATAATCCAATCAAGAAAGGTAGCTGAAGTAATGGAAACTATTGATAGAGGTTTGTTCGTACCCAATGGAACCCCACCTTATGTTGACAGCCCAATCCCAATAGGCTATAATGCCACTATATCTGCGCCGCACATGCATGCCACCTGCCTTCAATTGCTTGAGGAGAATTTACAACCCGGGATGCATGCGCTGGATGTTGGCTCTGGAACTGGGTACTTGACGGCATGCTTTGCAATGATGGTTGGACCACAAGGCCGTGCTGTTGGTGTGGAGCATATTCCTGAATTGGTTTCCTCCTCAACCGAGAATATTCAGAAGAGTGCTGCTGCGTCACTACTGAAAGATGGTTCCCTTTCTGTGCATTCTGGTGATGGGAGGCAAGGTTGGCCAGAGTTTGCTCCTTACGATGCCATTCACGTTGGGGCAGCGGCCAAGGAGATTCCACAACCACTTATTGACCAGTTGAAGCCAGGAGGTAGAATGGTGATTCCTGTTGGCGTCCTATTTCAGGATTTGCAGGTTGTGGATAAGAACTCTGATGGTTCCATCAGTATCCGGACGGAGACTTCTGTTCGTTATGTGCCTCTAACCAGTAAAGAAGCTCAACTGCAAGGTTAA 729 0.4664 MNPKSKLNLILHKVQQYWSGNAVNQNKGMVENLQRYGIIQSRKVAEVMETIDRGLFVPNGTPPYVDSPIPIGYNATISAPHMHATCLQLLEENLQPGMHALDVGSGTGYLTACFAMMVGPQGRAVGVEHIPELVSSSTENIQKSAAASLLKDGSLSVHSGDGRQGWPEFAPYDAIHVGAAAKEIPQPLIDQLKPGGRMVIPVGVLFQDLQVVDKNSDGSISIRTETSVRYVPLTSKEAQLQG 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01618 242 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 211 IPR029063 -
Aip01g01618 242 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 160 175 IPR000682 GO:0004719|GO:0036211
Aip01g01618 242 CDD AdoMet_MTases 101 202 - -
Aip01g01618 242 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 25 237 - -
Aip01g01618 242 Gene3D Vaccinia Virus protein VP39 18 242 IPR029063 -
Aip01g01618 242 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 13 242 - -
Aip01g01618 242 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 13 242 IPR000682 GO:0004719|GO:0036211
Aip01g01618 242 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 24 239 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01618 Aip-Chr1 60369057 60372213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01618 K00573 - gmx:100527082 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01618 01 60369057 60372213 Aip01g01618 01 60369057 60372213 ECH
Aip01g01618 01 60369057 60372213 Aip01g01618 01 60369057 60372213 PCT