Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01613 ATGCAAATAATGTGTGTCCCTATTCAATACACACATTCATATCCGCTATATATGTATCCTCGAAACCTAGCACCCGAAAATCCCATTCTTCTAAGTTTCACAACAGAAAAATCTCAAAAGCAGAAATACACAACAAACTCAGAAGTCAAAACCAACAGAAAAACCCAGAGATTCATCACAAGTAGCGTTTCAGCTTCATACATGGGATTTCCAACCAACGGCGCCGGAGCTAACAAGCCCTTCAAGTTCCTCCTGTACGGTAAAACGGGCTGGATAGGGGGCCTGCTGGGGGACCTCTGCCGGGCCCAAGGGATAGAATTCTCCTACGGGTCGGGACGACTGGAAAACAGGGCTTCCCTTGAGGCGGACATAGCGGCGGCGAAGCCCACACACGTGTTGAACGCGGCGGGTGTGACGGGCCGGCCCAACGTGGACTGGTGTGAATCACACAAGGTGGAGACTATACGGGCCAACGTGGTCGGAACCCTGACGCTTGCTGACGTGTGCCGCGAGAATGGTTTGTTGTTGGTTAATTTTGCCACGGGATGCATCTTTGAATATGATAAGGATCATCCTCTTGGATCTGGTATTGGATTCAAGGAAGAGGATACTCCTAATTTCATTGGATCCTTCTACTCCAAGACCAAGGCCATGGTAGAAGATCTGCTGAGAAACTATGATAATGTATGTACCTTGCGAGTTAGGATGCCTATCTCCTCTGATTTATCAAACCCACGGAACTTCATCACGAAGATAACTCGGTACGACAAGGTAGTGGACATTCCGAATTCGATGACCATACTGGACGAACTACTCCCCATCTCCATAGAGATGGCAAAGAGGAACCTCACCGGAATATGGAACTTCACAAACCCGGGTGTGGTGAGCCACAACGAAGTCCTACAGATGTACAAAGACTACATTGACCCCAACTTCTCATGGAAGAACTTCGACCTCGAGGAACAGGCCAAGGTCATCGTTGCACCTAGAAGCAACAATGAGCTTGATACAACTAAGTTGAAGAATGTGTTCCCGGAACTCTTGTCTATTAAGGAGTCCCTTGTCAAGTATGTCTTCCAGCCAAATCGAAAGGTCAATGCTTGA 1104 0.4783 MQIMCVPIQYTHSYPLYMYPRNLAPENPILLSFTTEKSQKQKYTTNSEVKTNRKTQRFITSSVSASYMGFPTNGAGANKPFKFLLYGKTGWIGGLLGDLCRAQGIEFSYGSGRLENRASLEADIAAAKPTHVLNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLLVNFATGCIFEYDKDHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLRNYDNVCTLRVRMPISSDLSNPRNFITKITRYDKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEVLQMYKDYIDPNFSWKNFDLEEQAKVIVAPRSNNELDTTKLKNVFPELLSIKESLVKYVFQPNRKVNA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01613 367 Gene3D - 74 367 - -
Aip01g01613 367 PANTHER BNAC05G13120D PROTEIN 62 363 - -
Aip01g01613 367 Pfam RmlD substrate binding domain 83 253 IPR029903 -
Aip01g01613 367 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 62 363 - -
Aip01g01613 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 78 358 IPR036291 -
Aip01g01613 367 CDD dTDP_HR_like_SDR_e 82 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01613 Aip-Chr1 60159321 60161539 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01613 K12451 - qsu:111989310 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01613 01 60159321 60161539 Aip01g01613 01 60159321 60161539 ECH