Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01608 ATGGATGTTTGGTGGTTGAGGCTTATTCTTCTTCCTACTACTCTTGCTCTCTTCTTACTTTCTCCTCAGCATTGTTCTTCCCAAAAAGTTCCAAACTATACATTTATGCGCAGTGCAACAACAGCATCAAACATCTCATACTACGATTACATTGTAATCGGCGGGGGCACAGCCGGATGCCCCTTGGCAGCGACATTGTCTCAAAATTACAGAGTGTTGCTTCTAGAACGAGGCGGATCGCCCTATGGCAACCCGAACATCACCAACTTGGCCGCCTTTGGCGCCGCCCTCTCCGACACTTCCCCCACCTCTCCCGCTCAGCGCTTCATCTCCGAAGATGGCGTCATCAATTCAAGAGCTCGCGTTCTTGGTGGCGGAAGTTGTTTGAATGCCGGCTTCTATACTCGTGCTGGACCCAACTATATAAGGGAAGCGGGATGGGATGGAAGGGCAGTGAATGAAGCATACAGATGGGTTGAGAAAAAGGTAGCATTTGAGCCAAAGGTTCAGCAATGGCAATCAGCGGTGAGGGATGGACTGTTGGAGGTAGGTGTGGTCCCCAACAATGGCTTCACTTACGACCATATTTATGGGACTAAGGTTGGTGGCACCATTTTTGACCAAAATGGATACAGGCACACTTCTGCTGATCTTTTGCAGTATGCAAACCCTTCTCGGATCACTGTCCTCTTGCATGCCAGCGTTCATAGGATATTGTTTCGTACTAAAGGTGGGTCAAGGCCGAAGGCCCAAGGAGTAGTGTTCAGAGACGCATTAGGGCGCAAACACAGGGCATACCTTAGGAGAGGGCCCAGGAACGAGATAATTGTATCAGCCGGTGCACTTGGAAGCCCACAGCTTCTTATGCTAAGTGGAATTGGGCCTGAAAGGCAACTTCGGGCCCACAACATAAATGTAACGTTGGAGCAGCCATTGGTAGGACAAGGAATGTCCGATAACCCGATGAATGCCGTCTTCATCCCTTCTCCGGTGCCCGTTGAGGTATCCCTCATTGAGGTCGTCGGCATCACCAAATTCGGCACCTACATTGAAGCTGCCAGCGGAGAAAACTTTGCTGGCGGCACCTCACCCAGAGATTTCGGAATGTTCTCCCCCAAGATTGGTCAATTTTCCACAGTGCCTCCAAAGCAAAGAAGTCCCGAAGCACTAGCAAAAGCAATAGAAATGATGGACACACTGGACCACGCAGCATTCAGGGGAGGATTCATCCTGGAAAAAATCATGGGTCCAATCTCAACAGGCCACATGGAGTTGAGAACCCTAAATCCCAACGACAACCCTTCGGTTACCTTCAACTACTTCAAAGAACCGCGCGACCTGCAGCGCTGCGTTCAAGGATTAAGAACCATCGAGAAGGTCATCGACTCGAAGCCCTTCGCCCCCTTCCGCTACGTCAACATGCCGGTCCCCGTGCTCCTCAACATGACCGCTAACTCCCCCGTCAACCTGCTGCCTCGCCATTCGAACTCTTCGCTGTCGTTGGAGCAGTTCTGCCGGGACACCGTCATGACCATTTGGCATTACCATGGCGGCTGCCAGGTTGGCAGGGTTGTTGATAGCGACTATAAGGTTCTTGGTGTCGATGCATTAAGGGTTATTGATGGTTCAACTTTTAACTATTCTCCTGGAACTAATCCTCAGGCCACCGTCATGATGCTTGGCAGGTACATGGGAGTTAAAATGTTGAAAGAGAGGCTTGCTTTTGATGCTGATGGAATGGGGAGAGTGTAA 1752 0.5046 MDVWWLRLILLPTTLALFLLSPQHCSSQKVPNYTFMRSATTASNISYYDYIVIGGGTAGCPLAATLSQNYRVLLLERGGSPYGNPNITNLAAFGAALSDTSPTSPAQRFISEDGVINSRARVLGGGSCLNAGFYTRAGPNYIREAGWDGRAVNEAYRWVEKKVAFEPKVQQWQSAVRDGLLEVGVVPNNGFTYDHIYGTKVGGTIFDQNGYRHTSADLLQYANPSRITVLLHASVHRILFRTKGGSRPKAQGVVFRDALGRKHRAYLRRGPRNEIIVSAGALGSPQLLMLSGIGPERQLRAHNINVTLEQPLVGQGMSDNPMNAVFIPSPVPVEVSLIEVVGITKFGTYIEAASGENFAGGTSPRDFGMFSPKIGQFSTVPPKQRSPEALAKAIEMMDTLDHAAFRGGFILEKIMGPISTGHMELRTLNPNDNPSVTFNYFKEPRDLQRCVQGLRTIEKVIDSKPFAPFRYVNMPVPVLLNMTANSPVNLLPRHSNSSLSLEQFCRDTVMTIWHYHGGCQVGRVVDSDYKVLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGVKMLKERLAFDADGMGRV 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01608 583 Pfam GMC oxidoreductase 48 321 IPR000172 GO:0016614|GO:0050660
Aip01g01608 583 Gene3D - 48 561 IPR036188 -
Aip01g01608 583 SUPERFAMILY FAD-linked reductases, C-terminal domain 317 518 - -
Aip01g01608 583 SUPERFAMILY FAD/NAD(P)-binding domain 47 571 IPR036188 -
Aip01g01608 583 ProSitePatterns GMC oxidoreductases signature 2. 280 294 IPR000172 GO:0016614|GO:0050660
Aip01g01608 583 Pfam GMC oxidoreductase 417 562 IPR007867 GO:0016614
Aip01g01608 583 PIRSF Alcohol_oxidase 23 578 IPR012132 GO:0050660
Aip01g01608 583 PANTHER OSJNBA0019K04.7 PROTEIN 17 573 - -
Aip01g01608 583 Gene3D - 165 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01608 Aip-Chr1 59590439 59598091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01608 3 576 Miscellaneous Gene Families AT5G51950 58.997 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01608 - - ahf:112722126 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01608 01 59590439 59598091 Aip01g01608 01 59590439 59598091 ECH