Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01600 ATGCATAGCAGACATTTCACTCCCAATGATCCTAACTTCCCTCAATACAAACTGCTCGCCCTCACCATGCACAGAACTGTTCTCCTCCTTCTCGTAACTTCCATTCTCATTTCCTTCTTGTGGCTAAACATGCGCACCATCTTAGTCTTTTTCGGTCAAGAACAAGAAATCGCAAACGAGGCTCAAGTCTTCATCTATTATTCTCTCCCTGATCTCGTAGCGCAGTCTCTCCTTCACCCTCTCAGAATCTACCTTCGCACTCAGTCCATTACTCTCCCTCTCACGTGCTGCTCCGCATTCTCCATCCTCCTGCACGTGCCAATCAACTATCTTTTCCTCCAAGTTCTTCATCTCGGAATCAGAGGCATCGCCTTGGCCTCTGTCTGGACCAACTTCAACCTCGTCATTTCTCTGATTATTTACACCGTCGTCTCAGGGTACCACAGGACAACATGGACACGTGTCACGCTCTCCAAGTGCTTCAGCGGGTGGAAGAAGCTCCTGAGTCTCTCGATTCCGAGCTGCGTTTCTGTCTGCCTCGAATGGTGGTGGTACGAAATCATGATCTTGCTCTGCGGATTGCTTATGGATCCGCACGCGAGCGTTGCGTCCATGGGGGTTCTGATTCAAACTACTGCGTTGATATACATTTTCCCATCTTCGCTGAGCTTCGGCGTCTCGACAAGAGTTGGAACCGAGTTAGGAGCAGAGAATCCCAATAGGGCGAAACTGGCCGCAATACTGGGACTATGCTTCAGTTTCGTCCTCGGATTCTCTGCTTTGATATTTGCGGCTTCGGTGAGGAACGTTTGGGCTTCGATGTTCACGGAAGACGAAAAGATCATAGCGTTGACGACGATGGTGTTACCGATAATTGGGTTGTGTGAGATTGGGAACTGTCCGCAAACAACGGTTTGCGGGGTTTTGAGGGGAACAGCGAGACCAAAGTTGGGAGCGAACATAAACTTGGCTTGTTTCTATGTTGTGGGAATGCCGGTGGCGGTTTGGTTGGGTTTCTTTCAAGGGTTTGATTTTAAGGGGTTGTGGTTGGGTATGTTGGCAGCGCAGGGTTCTTGTATGGTCACCATGTTGTTTGTTTTGGTCAGGACCAATTGGGATGGTCAAGCACAAAGGGCCAAGGACTTGATGACGTCATCCGAAGAATTAGATTTAGGAGATGACGGTGATGACCATGACGATGAGGACCAATATGTTGAGAAATGGTGTTTGGGAATATGTTATGACACAAAAGAACTTGTTTGA 1263 0.4838 MHSRHFTPNDPNFPQYKLLALTMHRTVLLLLVTSILISFLWLNMRTILVFFGQEQEIANEAQVFIYYSLPDLVAQSLLHPLRIYLRTQSITLPLTCCSAFSILLHVPINYLFLQVLHLGIRGIALASVWTNFNLVISLIIYTVVSGYHRTTWTRVTLSKCFSGWKKLLSLSIPSCVSVCLEWWWYEIMILLCGLLMDPHASVASMGVLIQTTALIYIFPSSLSFGVSTRVGTELGAENPNRAKLAAILGLCFSFVLGFSALIFAASVRNVWASMFTEDEKIIALTTMVLPIIGLCEIGNCPQTTVCGVLRGTARPKLGANINLACFYVVGMPVAVWLGFFQGFDFKGLWLGMLAAQGSCMVTMLFVLVRTNWDGQAQRAKDLMTSSEELDLGDDGDDHDDEDQYVEKWCLGICYDTKELV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01600 420 PANTHER PROTEIN DETOXIFICATION 49 15 389 - -
Aip01g01600 420 Pfam MatE 16 111 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip01g01600 420 Pfam MatE 173 336 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip01g01600 420 TIGRFAM matE: MATE efflux family protein 20 349 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip01g01600 420 PANTHER MULTIDRUG RESISTANCE PROTEIN 15 389 - -
Aip01g01600 420 CDD MATE_eukaryotic 15 378 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01600 Aip-Chr1 59222380 59223642 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01600 K03327 - gmx:100778250 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01600 01 59222380 59223642 Aip01g01600 01 59222380 59223642 ECH