Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01536 ATGGCATCCTCTTCTACTTCTTCTTCTCCTTCTCAATCTTCCAAATCGCCAAACTCACCCTTCTCTCTCAACCCCAACCGATTCGGCCTCGTTAAAACATTTGCTGCCCCGCCCTCCCCTCTCCAAATGGACCACAACACTGCTTCTCAGAACCATCATTCTTCCTTGCCGGAGTTACTGACGGAGTACATGGTGGATATGAAGTGTGAAGGTTGTGTTAATGCTGTTAAAAACAAGTTGCAGACCATCAATGGAGTGAAGGATGTAGAGGTGGACTTGAGCAATCAGGTAGTTAGGATTCGTGGTTCGACTCCAGTGAAGACCATGACTGAAGCTTTGGAACAGACTGGTAGAAAAGCCCGATTAATCGGACAGGGAACACCTGAAGACTTCTTAATATCTGCCGCTGTTTCTGAATTCAAAGGTCCAGACATTTTTGGAGTTGTTCGCCTAGCTCAAGTAAACATGGAACTAGCTAGGATTGAAGCCAACTTCAGTGGTTTGTCACCAGGAAAGCATGGTTGGTCCATTAATGAGTATGGGGACCTGACTAGAGGTGCAGCTAGCACTGGTAAAGTATACAATCCAACAGACGGGGAAGATGCTAAACAGCCACTTGGCGACCTGGGAACATTAGAAGCTAACGAAAAGGGCGAAGCCTTCTACACTGGGGTCAAAGAAAAGCTCAAGGTAGGTGATCTTATTGGACGATCAGTGGTTGTATATGCAACTGAAAACAAATCAGAACATGGTATAGCTGCTGCTGTAATCGCCAGAAGTGCAGGGGTGGGAGAGAACTACAAAAAACTCTGTACATGTGATGGCACCACCATTTGGGAGGCAAGTGACAGAGATTTTGTCACAAGCAAGGTCTGA 876 0.4623 MASSSTSSSPSQSSKSPNSPFSLNPNRFGLVKTFAAPPSPLQMDHNTASQNHHSSLPELLTEYMVDMKCEGCVNAVKNKLQTINGVKDVEVDLSNQVVRIRGSTPVKTMTEALEQTGRKARLIGQGTPEDFLISAAVSEFKGPDIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEYGDLTRGAASTGKVYNPTDGEDAKQPLGDLGTLEANEKGEAFYTGVKEKLKVGDLIGRSVVVYATENKSEHGIAAAVIARSAGVGENYKKLCTCDGTTIWEASDRDFVTSKV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01536 291 ProSiteProfiles Heavy-metal-associated domain profile. 59 122 IPR006121 GO:0046872
Aip01g01536 291 CDD HMA 62 121 IPR006121 GO:0046872
Aip01g01536 291 Pfam Heavy-metal-associated domain 63 119 IPR006121 GO:0046872
Aip01g01536 291 Gene3D - 46 129 - -
Aip01g01536 291 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 15 291 IPR024134 -
Aip01g01536 291 SUPERFAMILY Cu,Zn superoxide dismutase-like 126 283 IPR036423 GO:0006801|GO:0046872
Aip01g01536 291 Gene3D Superoxide dismutase, copper/zinc binding domain 130 259 IPR036423 GO:0006801|GO:0046872
Aip01g01536 291 SUPERFAMILY HMA, heavy metal-associated domain 60 123 IPR036163 GO:0046872
Aip01g01536 291 MobiDBLite consensus disorder prediction 1 23 - -
Aip01g01536 291 Pfam Copper/zinc superoxide dismutase (SODC) 147 250 IPR001424 GO:0006801|GO:0046872
Aip01g01536 291 PANTHER COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE, CHLOROPLASTIC/CYTOSOLIC 15 291 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01536 K04569 - gmx:547617 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01536 01 52650860 52654216 Aip01g01536 01 52650860 52654216 ECH