Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01535 ATGACTGGAATAACGTTGCGTAGTTCGAGGCAATTGAGTCGGGGAGGCGCAAGAGCAGAGCAGGCACGAGAGCTGCTTGGGCGTTGCTCAAATAAGAGGCATCTTTGCCAAATGCAGGCCTTCATGCTTACCACAGGTCTTGTTGAAGATGACATACTTCTCTCGCGATTCATATACGCCTCCGCGTCGCTTGGTTTTCCCTCGTATGCCTACTCCGTATTTTCCAACACCCACACGCACTGCCCCAGCATCTTTGTCTACAACAACATTATATGGGCTCTTTCTTCCTCCAATCCCGCTCTTGCCTTTTCAATCTTCAACTCTATTCGTCGCCTTAGCCTCAGGCCCGACTCTTATTCTTTCCCCTTTGTACTCAAGGCTGTCCTCTGCTTAGTAGATTCACCAATTGCCCTTTCCCTTGCTTCCCAAATTCACTCCCAAGCTGTTGCTGCTGGGTTGAACTCCCATCATGAAGTGGCTGCGTCCCTTGTTCGCGTGTATTCCTCCTGTGGCCGTTTGTCTTGCGTTCGGAAGCTCTTCGATGAAGTCCCACTCTCTTCCAGGAATGCTATTGATTCCTCTTTATTCAAGCAATGGTTGCATAACTTGCAAAGTGAGACTGGGATTCTAGCTGATGGCACCTTGGCTCTGAGACAAGTTCTAATTCAGGGTGTAGACATGTTTGGAAAGCGCATTGGGTTTCTCAAATTTAAAGCTGACATTTATGACAAACAAACGGGGAAGAAGGTTCCAGGTATTGTATTTGCAAGAGGACCTGCTGTGACTGTGTTGATACTTCTGGAATCAGATGGTGAAACTTATGCTGTCCTTACTGAACAGGCAAGGGTTCCTACTGGAAGAATTATTTTGGAATTGCCTGCTGGAATGTTGGATGATGACAAGGGTGATTTTGTTGGCACTGCAGTTCGTGAGGTTGAAGAGGAGACTGGCATAAAGTTAAAACTTGAAGACATGGTTGATCTCACTGCTTTCTTGGATTCTTCAACAGGATGCAGATTTTTTCCCTCACCGGGAGGGTGTGATGAAGAGATCAGTATCTTTCTGTACCGAGGGCGTGTTGACAAAGAGATCATCACACAGCTACATGGGAAAGAAACCGGCCTTCGTGATCATGGGGAGCTGATTAAGGTACGTGTAGTACCATACAAGAAACTGTGGCGCACCACGGCAGATGCCAAGGCTTTGGCGGCTGTTGCACTGTTTGAAATGGTTACCAAGGAGGGGCTATTGCCTCCTTCACCAACCTAG 1269 0.4752 MTGITLRSSRQLSRGGARAEQARELLGRCSNKRHLCQMQAFMLTTGLVEDDILLSRFIYASASLGFPSYAYSVFSNTHTHCPSIFVYNNIIWALSSSNPALAFSIFNSIRRLSLRPDSYSFPFVLKAVLCLVDSPIALSLASQIHSQAVAAGLNSHHEVAASLVRVYSSCGRLSCVRKLFDEVPLSSRNAIDSSLFKQWLHNLQSETGILADGTLALRQVLIQGVDMFGKRIGFLKFKADIYDKQTGKKVPGIVFARGPAVTVLILLESDGETYAVLTEQARVPTGRIILELPAGMLDDDKGDFVGTAVREVEEETGIKLKLEDMVDLTAFLDSSTGCRFFPSPGGCDEEISIFLYRGRVDKEIITQLHGKETGLRDHGELIKVRVVPYKKLWRTTADAKALAAVALFEMVTKEGLLPPSPT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01535 422 SUPERFAMILY Nudix 234 409 IPR015797 -
Aip01g01535 422 ProSiteProfiles Nudix hydrolase domain profile. 256 409 IPR000086 -
Aip01g01535 422 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 179 419 - -
Aip01g01535 422 Pfam NUDIX domain 257 400 IPR000086 -
Aip01g01535 422 CDD ADPRase_NUDT5 257 394 - -
Aip01g01535 422 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 227 414 - -
Aip01g01535 422 PANTHER NUDIX HYDROLASE 14, CHLOROPLASTIC 179 419 - -
Aip01g01535 422 Gene3D Tetratricopeptide repeat domain 12 189 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01535 Aip-Chr1 52647435 52650126 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01535 K18447 - gmx:100809537 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01535 01 52647435 52650126 Aip01g01535 01 52647435 52650126 ECH