Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01532 ATGGTGGAGGCACAGACATGGACAACCAGAAGGATGAGCAATCCGAGGTTGTTGGACAACTCATCCACCAACAACAATCCCGACCAAGTACTGGACATCCCGGCGACACCGCCATCGGAAGCAAGAAACAACCACCTAAACGGCCTAAAAAGTGGCATCGCCACCACCACCTCCATGTCCCCAACGATCCTAACTGCAATCATAATTGCGTCGTGGTACTTCTCCAACATCGGCGTCCTCCTCCTCAACAAGTACCTCCTCAGCTTCTATGGTTACCGCTACCCAATCTTTCTCACCATGCTCCACATGCTATCCTGCTCCGCTTACAGCTACGCGTCCATTAACTTCCTGGAGCTCGTTCCTCCTCAGCACATCCACTCCAAGAAGCAGTTCCTTAAGATCCTCGCACTCAGCGCCATCTTCTGCTTCTCTGTTGTCTGCGGCAACACCTCCCTCAGGTACATTCCTGTGTCTTTCAACCAAGCAATAGGAGCAACGACCCCGTTCTTCACAGCCATCTTCTCTTTCATCATAACCTGCAAGAAAGAAACCGGTGAAGTATACGTGGCACTCTTGCCTGTTGTTCTTGGCATCGTAGTCGCCAGCAACAGCGAGCCTCTCTTCCACTTGTTCGGCTTCTTGGTTTGCGTGGGTTCAACCGCGGGTCGAGCACTGAAATCGGTTGTCCAGGGAATCCTCTTAAGTTCAGAAGGCGAAAAGCTTCACTCTATGAACCTTCTTCTTTACATGGCTCCAATGGCGGCCATGATATTGCTGCCATTTACTCTCTACATCGAAGGGAACGTTTTCAGTGTGACGATTGAGAAGGCGAAGGAGGATCCGTATATGGTGTTCTTGTTGCTTGGGAATGCCACGGTGGCGTATTTGGTGAATTTGACGAATTTCTTGGTCACGAAGCACACCAGTGCCTTGACTTTACAAGTGTTGGGAAACGCCAAAGCTGCGGTTGCGGCGGTTGTTTCTGTTTTGATATTCAGGAATCCTGTCACGGTTATGGGGATGGCGGGCTTTGGAATAACCGTTATGGGGGTCGTTCTCTACAGTGAGGCTAAGAAGAGATCCAAAGTCACAACACATTGA 1101 0.5023 MVEAQTWTTRRMSNPRLLDNSSTNNNPDQVLDIPATPPSEARNNHLNGLKSGIATTTSMSPTILTAIIIASWYFSNIGVLLLNKYLLSFYGYRYPIFLTMLHMLSCSAYSYASINFLELVPPQHIHSKKQFLKILALSAIFCFSVVCGNTSLRYIPVSFNQAIGATTPFFTAIFSFIITCKKETGEVYVALLPVVLGIVVASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLSSEGEKLHSMNLLLYMAPMAAMILLPFTLYIEGNVFSVTIEKAKEDPYMVFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMAGFGITVMGVVLYSEAKKRSKVTTH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01532 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 279 356 - -
Aip01g01532 366 PANTHER SOLUTE CARRIER FAMILY 35 50 363 - -
Aip01g01532 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 127 203 - -
Aip01g01532 366 MobiDBLite consensus disorder prediction 1 37 - -
Aip01g01532 366 MobiDBLite consensus disorder prediction 1 32 - -
Aip01g01532 366 Pfam Triose-phosphate Transporter family 66 355 IPR004853 -
Aip01g01532 366 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 50 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01532 Aip-Chr1 52425738 52427540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01532 1 363 Organic Solute Cotransporters AT1G12500 76.309 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01532 - - gmx:100813464 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01532 01 52425738 52427540 Aip01g01532 01 52425738 52427540 ECH