Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01496 ATGGCTTTGTTTAGAGCTCTTGTGCTCTTCTTCTTCTTCTTCTTCCTAACCAACGTTTCTCTGCTTCTCAACTTCACTAACGCTGAGGATCCATTTGCTTTCTACAACTTTGAGGTCACTTACCTCACTGCTTCTCCTCTTGGAGTTCCTCAACAGGTCATTGCTATAAACGGCAAGTTTCCAGGTCCAACCATCAATGTGACCACAAACAACAACGTTGTTGTCAATGTCCGGAACAAGCTTGATGAGAACCTCCTCCTTCACTGGTCTGGGGTTCAACAAAGAAGAAGTTCTTGGCAAGATGGTGTTCTTGGCACAAACTGTCCAATTCCTCCAAAGTGGAACTGGACTTACCAGTTTCAGGTTAAGGATCAGATTGGAAGCTTCTTCTACTTCCCTTCACTTAATATGCAGAGAGCAGCTGGTGGATTTGGTGGATTCATTATAAACAACCGACCCATTATTCCAATTCCTTTTGACACCCCACATGGGGACATTGTCATTATGATTGGCGATTGGTACACTCGCAATCACACGGATTTGAGGAAGGACCTTGATGCTGGAAAAGATCTTGGGATGCCTGATGGTGTTCTCATAAATGGAAAGGGTCCTTATAGATATAATGATACACTTGTTCCCGACGGCATTGATTTTGAGCAGTTTGATGTCCATCCTGGGAAAACTTACCGACTTCGTGTACATAATGTTGGAGTGTCAACAAGTCTGAATTTCAGGATCCAGAGCCATAATTTACTTCTAGCAGAGAGTGAGGGATCGTATACAGTGCAACAGAATTACACTAGCTTAGATATTCATGTTGGACAGTCGTATTCTTTTCTGGTAACCATGGATCAGAACGCAAGTTCAGATTACTATATCGTTGCAAGCGCCAGGTTTGTGAACGAATCACGCTGGCAAAGAGTAACCGGAGTTGGTATCTTACGCTATACAAATTCCAAGGGTAAGGCGCATGGTCCTCTTCCACCACCTCCAGATGATGAATTTGACAAGACTTTCTCAATGAACCAAGCAAGATCCATCAGATGGAATGTATCAGCAAGTGGTGCTCGTCCCAACCCACAAGGGTCTTTCCGATATGGTTCCATCAATGTGACCGAAATTTATGTACTAAGAAACAAGCCAAGAGAGAAAATCAACGGGAAGAATCGAGCAACACTCAGTGGCATCTCTTTTGTCAATCCTTCCACTCCAATCAGGCTTGCTGACAAGTACAAATTAAAAGGAGTATACAAGCTTGATTTCCCCACCAATCCTATAACTGGACCACCTCAGGCCAAGACATCGGTGATTAATGGAACTTACAGGGGATTTATGGAGATTATACTGCAAAACAACGACACCAAGATGCATTCCTATCACTTGGATGGTTATGCCTTTTTTGTTGTCGGGATGGATTATGGTGAGTGGACTAATAATAGCAGGGGCACATATAACAAATGGGATGGAATAGCTCGCACCACAGCACAGGTTTATCCCGGAGCATGGACAGCAATTTTAGTCTCGCTCGACAATGTCGGAGTTTGGAATCTCAGAACAGAAAACCTCGACAACTGGTATCTCGGTCAAGAAACATACATCAGAGTTGTCAATCCAGAGGCTAACAACAAGACTGAGCTTCCCATGCCAGACAATGCCCTTTTCTGCGGCGCCCTTGGGAAACTGCAGAAGCCTCAAGATATTAGTGCCGGTGCATCAATCGGTAAGAATACAGTGAAGCTGTTGTTCACTTGGCTGGTGTTTGTATGCGCCTTGATCCCCATTTTCTAG 1788 0.4407 MALFRALVLFFFFFFLTNVSLLLNFTNAEDPFAFYNFEVTYLTASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDENLLLHWSGVQQRRSSWQDGVLGTNCPIPPKWNWTYQFQVKDQIGSFFYFPSLNMQRAAGGFGGFIINNRPIIPIPFDTPHGDIVIMIGDWYTRNHTDLRKDLDAGKDLGMPDGVLINGKGPYRYNDTLVPDGIDFEQFDVHPGKTYRLRVHNVGVSTSLNFRIQSHNLLLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNESRWQRVTGVGILRYTNSKGKAHGPLPPPPDDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLRNKPREKINGKNRATLSGISFVNPSTPIRLADKYKLKGVYKLDFPTNPITGPPQAKTSVINGTYRGFMEIILQNNDTKMHSYHLDGYAFFVVGMDYGEWTNNSRGTYNKWDGIARTTAQVYPGAWTAILVSLDNVGVWNLRTENLDNWYLGQETYIRVVNPEANNKTELPMPDNALFCGALGKLQKPQDISAGASIGKNTVKLLFTWLVFVCALIPIF 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01496 595 Pfam Multicopper oxidase 404 539 IPR011706 GO:0005507|GO:0016491
Aip01g01496 595 Gene3D - 163 356 IPR008972 -
Aip01g01496 595 Gene3D - 368 564 IPR008972 -
Aip01g01496 595 Gene3D - 22 151 IPR008972 -
Aip01g01496 595 Pfam Multicopper oxidase 39 152 IPR011707 GO:0005507
Aip01g01496 595 SUPERFAMILY Cupredoxins 28 179 IPR008972 -
Aip01g01496 595 SUPERFAMILY Cupredoxins 161 358 IPR008972 -
Aip01g01496 595 Pfam Multicopper oxidase 165 318 IPR001117 -
Aip01g01496 595 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 17 567 - -
Aip01g01496 595 SUPERFAMILY Cupredoxins 383 556 IPR008972 -
Aip01g01496 595 PANTHER MULTI-COPPER OXIDASE 17 567 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01496 Aip-Chr1 50013330 50017671 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01496 - - gmx:100788318 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01496 01 50013330 50017671 Aip01g01496 01 50013330 50017671 ECH