Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01494 ATGGTGGTGGCAACATCGGCATTGATTGGATTTCACAATGCATATAGTGGGGAGCCCTTGTATTGTGCGGTTCAAGGAACAACGCATGGACGGCCGGTTCTTTCGCGAGGGGTGTCGGCCGGTGTATCGGAGAAGACCAATAGGCATTTGGGAGCAAAGCCATTCCCTGGCTGGAGCAACACCATGCTCTCGTGGCAGAGGACTGCCTTCCACTTCCAGCCCGATAAGAACTGGATGAACGTTTTAATATTCAAACATCATTATAATATCTCAGGTCCTGTATACTACAAGGAATGGTATCACTTCTTCTACCAGTATAATCCAAACGATGCCGTTTGGGGTGACATAGTTTGGGGCCACGCAGTGTCAAGGGACATGATCCACTGGCTTTACCTTCCAATCGCAATGGTTCCAGACCAATGGTACGATGCAAATGGTGTCTGGACCGGCTCAGCCACCATCTTATCCGATGGCCAACTCGTCATGCTCTACACCGGTTCGACCAACGAGTCGGTTCAAGTACAAAACCTGGCTTATCCGGCTGATCCTTCCGACCCTCTCCTTCTGAATTGGACCAAGTACGACAAAAACCCGGTTCTATCCCCTCCTCCGGGCATTCATTACCGCGACTTCCGCGATCCGACGACGGCCATGCTGACGTCGGAAGGCAAGTGGCGTATCAGCATTGGGTCCAAGATCAACAAAACCGGCATTGCGCTTATCTATGACACTGAGGATTTCAAAAATTTCGAGCTCAAGAATGGGTGGCTCCGGGCCGTGCAGGGAACCGGTATGTGGGAGTGCGTTGACTTTTATCCTGTGTCAAGCATCAATGATGTTGGATTGGATACCTCTGCCTATGGGGATGGTGTTAAGCATGTGGTGAAGGTGAGCTTGGATGATGATAGAAATGATTACTATGCAATTGGTTCTTATGATGAGAAGCTTGCAAGCTTCTTGCCTGATGATGTTAAGAATGATGTTGGTATTGGACTGAGGTATGACTATGGTAATTTCTATGCTTCCAAGACATTCTTTGATCCAAGTAAGCAAAGGAGAATCTTGTGGGGTTGGATTACAGAGTATGATAGCGAGTGTGTTGATAGAACCAAGGGCTGGGCATCACTTCAGGGCATTCCAAGGACAGTGAGACTTGATAGGAAGACAGGGAGCAATTTGATTCAGTGGCCTGTTGAGGAGGTGAATAGTTTAAGATTGAGAAGCAGTGAGTTTAAGGATTTGAAGGCCAAGCCTGGTTCAGTTGTTCCACTACAAGTTGAAACAGCCACACAGTTGGATATTGTTGCGGAATTTGAAGTAGACAAGGAAGCACTGGAGACAACATTACCGGAGAGCGATACAGACTACATTTGCGAAAGCAGCGGCGGAGCTTCTCGCCGTGGTGCCTTGGGACCTTTTGGTCTTCTTGTGTTAGCAGATGCTGGACTTTCTGAATTTACTCCTTTGTACTTCTATGTCACCAAAGGCCTCAATGGAAGTCTTCGCACTACTTTCTGCTCTGACCAGTCAAGGTCTTCTGTAGCAACGAATGTTAACAAGAAGGTGTTAGGTAGCGTTGTGCCAGTTTTTGGAGGTGAAAAGTTGTCTTTAAGAGTACTGGTGGACCATTCTATAGTTGAAAGCTTTGCTCAAGGTGGAAGGACTTGTGTGACATCTCGGGTGTATCCAACAAGAGCAATCTATGGAGCTGCCAAATTATTCGTCTTCAACAATGCAACTGATGCCACTGTCACAGCATCAATCAAAGTTTGGCAGATGAACTCCGCATTTATTCGCCCATACCACCCTGAAACTGACACTTAG 1824 0.4726 MVVATSALIGFHNAYSGEPLYCAVQGTTHGRPVLSRGVSAGVSEKTNRHLGAKPFPGWSNTMLSWQRTAFHFQPDKNWMNVLIFKHHYNISGPVYYKEWYHFFYQYNPNDAVWGDIVWGHAVSRDMIHWLYLPIAMVPDQWYDANGVWTGSATILSDGQLVMLYTGSTNESVQVQNLAYPADPSDPLLLNWTKYDKNPVLSPPPGIHYRDFRDPTTAMLTSEGKWRISIGSKINKTGIALIYDTEDFKNFELKNGWLRAVQGTGMWECVDFYPVSSINDVGLDTSAYGDGVKHVVKVSLDDDRNDYYAIGSYDEKLASFLPDDVKNDVGIGLRYDYGNFYASKTFFDPSKQRRILWGWITEYDSECVDRTKGWASLQGIPRTVRLDRKTGSNLIQWPVEEVNSLRLRSSEFKDLKAKPGSVVPLQVETATQLDIVAEFEVDKEALETTLPESDTDYICESSGGASRRGALGPFGLLVLADAGLSEFTPLYFYVTKGLNGSLRTTFCSDQSRSSVATNVNKKVLGSVVPVFGGEKLSLRVLVDHSIVESFAQGGRTCVTSRVYPTRAIYGAAKLFVFNNATDATVTASIKVWQMNSAFIRPYHPETDT 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01494 607 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 29 602 - -
Aip01g01494 607 Pfam Beta-fructofuranosidase, N-terminal domain 2 63 IPR021792 GO:0004564
Aip01g01494 607 Gene3D Glycosyl hydrolase domain; family 43 76 408 IPR023296 -
Aip01g01494 607 SUPERFAMILY Arabinanase/levansucrase/invertase 64 398 IPR023296 -
Aip01g01494 607 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 29 602 - -
Aip01g01494 607 SUPERFAMILY Concanavalin A-like lectins/glucanases 397 597 IPR013320 -
Aip01g01494 607 CDD GH32_Fruct1-like 77 385 - -
Aip01g01494 607 Pfam Glycosyl hydrolases family 32 N-terminal domain 71 397 IPR013148 -
Aip01g01494 607 Pfam Glycosyl hydrolases family 32 C terminal 400 592 IPR013189 -
Aip01g01494 607 Gene3D - 409 593 - -
Aip01g01494 607 SMART glyco_32 71 553 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01494 Aip-Chr1 49603864 49611259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01494 25 604 Glycoside Hydrolase AT1G12240 63.912 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01494 K01193 - gmx:100788844 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01494 01 49603864 49611259 Aip01g01494 01 49603864 49611259 ECH
Aip05g01012 05 14526438 14530642 Aip01g01494 01 49603864 49611259 PCT