Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01473 ATGCTCTCCGAGTTCAACGAGTTACAAGGGCAGCTTAAAATCCTGTGCCAAGAGAGATTGAACTTGCTTGATACAATAAGGCAGTTGGAGGCAGCTAATATTGAACCTGAGGCCTCTGCCATACATGATGGTGAATACCAATTGACAAAGAATGGATTTTCAAGTCTAGGACGCGCAAAATATAGCGAATGCAGTACAACTGAATCGTCTGATGATATCGAGAAGCAGGAGTTGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGATACTAGAGAGTATTTTACAGAACCTGGTTTTAGGTGTGGGTCAATAGGAACTTTGGACCAAGTGAACGGGTCTAAAGAAGCAAACACAGAATGTATTGATATGGAAAACATTAGTATTGAGAAGGCAATCAATAGTTTCAGATACCCTCACATAGTTAGGAGGAAAAAGCTTCCAGATCCTGTTGAGAAAGAGAAGGGCGTAAGTTTATGGTCAATGATCAAAGACAATGTGGGCAAAGATCTCACACGAGTTTGTCTTCCTGTGTACTTTAATGAACCAATATCGTCACTTCAGAAGTGTTTCGAGGACTTGGAGTACTCTTACCTTCTGGACCGAGCTTATGAATATGGAAAATCAGGAAACAGTCTCCTTAGGGCACTGAATGTTGCCGCATTTGCAGTTTCTGGATATGCCTCATCTGAAGGGCGTCATTGTAAACCCTTTAATCCTTTGTTAGGGGAAACTTATGAGGCTGACTTTCCTGACAAAGGACTTCGCTTCTTTTCTGAGAAGGTTAGCCACCATCCAACTGTAGTTGCGTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGCTGACAGCAACATCCGTTCAAAGTTTTGGGGAAGGTCCATTCAACTTGACCCGGTGGGAGTTCTTACCCTTCAGTTTGATGACGGTGAAACATTTCACTGGAGCAAGGTGACGACAACAATTTATAATCTTATCCTTGGAAAAATATATTGTGATCATCATGGGAACATGGACATTCGTGGCAATCGCCAGTATTCAATCAGACTCAAGTTCAAAGAACAGACGATTCTGGACCGAAATCCTCATCAGGTGAATGGATTTGTTGAAGATTTAAGGGGGAAAAAAGTTGCCACATTATTTGGCAAGTGGGATGACAGCATGTACTATGTTAATGGTGATGTGAATGTGAAGCCAAAAGGTTTCAATTCGTCAGATTCAACCTTGTTGTGGAAAAGGGTTATGCCACCCACTAATCTCACTCGGTACAATTTGACATCATTTGCCATCACACTCAACGAGCTTACACCAGGACTCAAGGAGAAACTCCCGCCCACTGATTCCAGGCTGAGGCCAGATCAGCGGCATCTAGAGAATGGGGAATACGAGAAGGCTAATATGGAGAAACAAAGATTGGAAAAGAGGCAAAGAATGTCACGAAAAATACAAGAAAGTGGTTGGAAGCCGAAATGGTTCCACCAAGAAGGTGAAAATGGAACATTTCGATATATTGGCGGGTATTGGGAAACGAGAGCTCAAGGAAAATGGGATGGATGCCCAGATATATTTGGTGAATTTAATGAAGTCACTGGGGAACCATTGGATGCGTCTTGA 1617 0.4249 MLSEFNELQGQLKILCQERLNLLDTIRQLEAANIEPEASAIHDGEYQLTKNGFSSLGRAKYSECSTTESSDDIEKQELEEVSDEDEISYYDTREYFTEPGFRCGSIGTLDQVNGSKEANTECIDMENISIEKAINSFRYPHIVRRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKSGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPDKGLRFFSEKVSHHPTVVACHCEGRGWKFWADSNIRSKFWGRSIQLDPVGVLTLQFDDGETFHWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSIRLKFKEQTILDRNPHQVNGFVEDLRGKKVATLFGKWDDSMYYVNGDVNVKPKGFNSSDSTLLWKRVMPPTNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKIQESGWKPKWFHQEGENGTFRYIGGYWETRAQGKWDGCPDIFGEFNEVTGEPLDAS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01473 538 Gene3D - 455 515 - -
Aip01g01473 538 PANTHER BNAC03G64980D PROTEIN 1 111 - -
Aip01g01473 538 PANTHER BNAC03G64980D PROTEIN 136 529 - -
Aip01g01473 538 Gene3D - 245 418 - -
Aip01g01473 538 Coils Coil 456 476 - -
Aip01g01473 538 Pfam Oxysterol-binding protein 159 512 IPR000648 GO:0008289
Aip01g01473 538 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 111 IPR000648 GO:0008289
Aip01g01473 538 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 136 529 IPR000648 GO:0008289
Aip01g01473 538 SUPERFAMILY Oxysterol-binding protein-like 154 528 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01473 Aip-Chr1 47812802 47821817 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01473 K20456 - gmx:100793692 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01473 01 47812802 47821817 Aip01g01473 01 47812802 47821817 ECH