Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01471 ATGGCAACTTTGCCTCAAACACAAGGGGAGACCATTCCCGATGCCTGGGACTACAAGGGTCGCCCAGCTGAGAGGTCCAAAACTGGTGGTTGGGCTGCTGCAGCCATGATCTTAGGAGGAGAAGCATGTGAGAGGTTAACCACGCTTGGAATCGCGGTGAATCTGGTGACGTATTTGACGGGTACGATGCATTTAAGAAATGCTGCTTCTGCAAACATAGTAACCAACTTCCTCGGAACCTCATTCATGCTCTGCTTGCTCGGTGGCTTCTTGGCTGATACTTTTATTGGAAGATACCTCACCATAGCCATCTTCGCAACCGTTCAAGCAACTGGAGTAACAATCTTGACAATATCAACCATAATTCCGGGACTACACCCTAGGAAATGCAAAGACCCATCCACACCTTGTGTACCTGCATCAAATACCCAACTCATGGTACTATACTTGGCGCTATACACAATCGCCCTCGGCACCGGAGGCCTCAAATCTAGCGTCTCAGGCTTCGGCTCCGACCAGTTTGACGAGTCGAACAAAGGGGAGAAGGGACAAATGACTAAGTTCTTCAACTGGTTCTTCTTCTTCATAAGCATAGGGTCCCTTTTGGCTGTTACGGTTCTTGTTTATATTCAAGATAACTTTGGCAGGGACTGGGGTTATGGTATATGTGCATGTGCTATATTGTGTGGATTGGTTGTGTTCTTGTCTGGAACTAGAAGGTACCGGTTCAAGAAACTGGTGGGGAGCCCGCTGACGCAGATCGCGGTGGTGTTTGTGGCGGCATGGAGGAAGAGGAGGTTGGAACTGCCGTCAGATTCGTCGTTGCTGTTCAACGTTGATGACATCATCTCTGATGAAGCAATCAGTAAGAAGAAGCAGATGTTGCCTCATACCAAGCAGTACCGATTCTTGGACAAGGCTGCAATTAGGGACTCAAACACCATCGGCGGCGAAACCACGGCGGAGAGAAAATGGTATCTATCAACCTTAACCGACATTGAAGAAGTAAAAATGGTTTTAAGGATGTTGCCAATATGGGCCACCACCATCATGTTTTGGACAGTCTACGCTCAAATGAGCACATTCTCAGTGTCACAAGCCACCACCATGGACCGCCACATCGGAAAATCGTTCCAAATCCCGGCGGCATCACTCACCGTCTTCTTCGTCGGAAGCATACTCCTTACCGTCCCCATCTACGACCGCGTGGTTGTCCCAATCATGAGAAAATCACTCAAGAACCCGCAAGGCCTGACGCCTTTGCAACGTATCGGCGTAGGGTTAGTACTCTCAATCTTCGCCATGGTTGCAGCCGCACTCACTGAGATAAAGCGATTAAGGGTCGCTGAGTCACATGGATTGGATCATGATGATGCTTCTAATAAGGTGGTACCGTTGAGCGTGTTCTGGCTAATCCCTCAGTTCTTCTTTGTGGGGTCAGGAGAGGCATTCACCTACATAGGTCAACTAGATTTCTTCCTAAGGGAATGTCCCAAAGGGATGAAAGCAATGAGCACCGGTTTGTTCTTGAGTACCTTGTCCTTAGGGTTCTTCTTCAGCTCCTTGTTGGTGACCATAGTGGACAAGGTCACTGGAACCCGAAAGCCATGGCTCGCCGACAACCTTAACAAAGGGAAACTCTACAATTTCTATTGGCTATTGGCTACTCTAAGTGCTTTGAACGTCGTGATTTTCTTACTATGTTCCAAGTGGTATGTTTACAAGGATAAAAGGCTTGCCGAGGAGGGCATTGAACTTGAGGAATCAGACACTGCTTACCATGCATAG 1788 0.4815 MATLPQTQGETIPDAWDYKGRPAERSKTGGWAAAAMILGGEACERLTTLGIAVNLVTYLTGTMHLRNAASANIVTNFLGTSFMLCLLGGFLADTFIGRYLTIAIFATVQATGVTILTISTIIPGLHPRKCKDPSTPCVPASNTQLMVLYLALYTIALGTGGLKSSVSGFGSDQFDESNKGEKGQMTKFFNWFFFFISIGSLLAVTVLVYIQDNFGRDWGYGICACAILCGLVVFLSGTRRYRFKKLVGSPLTQIAVVFVAAWRKRRLELPSDSSLLFNVDDIISDEAISKKKQMLPHTKQYRFLDKAAIRDSNTIGGETTAERKWYLSTLTDIEEVKMVLRMLPIWATTIMFWTVYAQMSTFSVSQATTMDRHIGKSFQIPAASLTVFFVGSILLTVPIYDRVVVPIMRKSLKNPQGLTPLQRIGVGLVLSIFAMVAAALTEIKRLRVAESHGLDHDDASNKVVPLSVFWLIPQFFFVGSGEAFTYIGQLDFFLRECPKGMKAMSTGLFLSTLSLGFFFSSLLVTIVDKVTGTRKPWLADNLNKGKLYNFYWLLATLSALNVVIFLLCSKWYVYKDKRLAEEGIELEESDTAYHA 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01471 595 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3-LIKE 10 587 - -
Aip01g01471 595 SUPERFAMILY MFS general substrate transporter 21 577 IPR036259 -
Aip01g01471 595 Pfam POT family 99 535 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aip01g01471 595 Gene3D MFS general substrate transporter like domains 5 582 IPR036259 -
Aip01g01471 595 MobiDBLite consensus disorder prediction 1 23 - -
Aip01g01471 595 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 587 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aip01g01471 595 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01471 Aip-Chr1 47155108 47163386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01471 3 591 Organic Solute Cotransporters AT1G12110 66.385 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01471 - - twl:119987275 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01471 01 47155108 47163386 Aip01g01471 01 47155108 47163386 ECH
Aip05g01005 05 14345994 14349506 Aip01g01471 01 47155108 47163386 PCT