Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01463 atggagcacagctccttgaacggAAGGAGAAGAAGCTCACAACGAAAGAGGACAACATCAGCGACAGTGAAGGCGGTGGAGATGGTGACGGATCTGCGACAGTGGAGGCACGGTAGTGACAGGCTCAACCCTCCTCCACGATGGTTTTGCCCTCCAACGGTGGCATTGGATGCAAACTCCCTCTCTCTTCCCAATCTCCCTCTTCCTAGAAACTCAACGGCGGCGACCATAGAGGCTCGGCGACGAAGCAACTCGGGGGTCCTGGTGTTGGCGCGAACCCTCGAAGACAGTGGCTTGGCAGTACGGAGGCAACGCGAGCTGGACGGCAGCGAGGCTTGGCTAGTTCATCGGCTCGGTGGGGGCGGCGCAACTGGTAGTGACACGCTCGCGATGAAGACGACACCAGTAAGGACCTCCGCGAAGACGTCGACAGAGCAGAACGCAGCGTCTCCTCCTCTTCTTCTCGGCTCTCCTCCATCTTCAAGTTCTCTTGCTCTCTTTGTCTCCATCAACTTGCTCTTCTTTGCACTAGCAAGTGGATGCTACACTTGTTCACACCCTACTCAACCTAAAAACCCTAACTCATTTTTCCCTTTCCCAAACCCTAACAATAATAAGGGATGTCCAAGAGATGCATTGAAGCTTGGAGTATGTGCCAAGATTCTTAATGGACCCATCGGTGCTGTGGTGGGTTCGCCGCCGGACCATCCATGTTGCTCAGTGCTAGATGGACTCATTGACCTCGAAGTGGCGGTTTGCCTTTGCACAGCGATCAAAGCTAACATTCTTGGAATTGACCTTAATATCCCAATTTCACTTAGCTTGCTCCTTAATGCTTGCGAGAAGACTCGACCCTCTGACTTCCAATGCTCCTAA 876 0.516 MEHSSLNGRRRSSQRKRTTSATVKAVEMVTDLRQWRHGSDRLNPPPRWFCPPTVALDANSLSLPNLPLPRNSTAATIEARRRSNSGVLVLARTLEDSGLAVRRQRELDGSEAWLVHRLGGGGATGSDTLAMKTTPVRTSAKTSTEQNAASPPLLLGSPPSSSSLALFVSINLLFFALASGCYTCSHPTQPKNPNSFFPFPNPNNNKGCPRDALKLGVCAKILNGPIGAVVGSPPDHPCCSVLDGLIDLEVAVCLCTAIKANILGIDLNIPISLSLLLNACEKTRPSDFQCS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01463 291 PANTHER - 161 290 - -
Aip01g01463 291 Pfam Hydrophobic seed protein 208 291 IPR027923 -
Aip01g01463 291 MobiDBLite consensus disorder prediction 1 21 - -
Aip01g01463 291 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 161 290 - -
Aip01g01463 291 MobiDBLite consensus disorder prediction 124 154 - -
Aip01g01463 291 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 210 290 IPR036312 -
Aip01g01463 291 MobiDBLite consensus disorder prediction 127 154 - -
Aip01g01463 291 Gene3D - 208 291 IPR036312 -
Aip01g01463 291 CDD HPS_like 208 290 IPR027923 -
Aip01g01463 291 SMART aai_6 208 290 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01463 Aip-Chr1 46654803 46657593 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01463 200 290 Acyl Lipid Metabolism Gene Families AT4G22490 38.298 1.69e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01463 - - var:108336118 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01463 01 46654803 46657593 Aip01g01463 01 46654803 46657593 ECH