Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01458 ATGGCTTCCAACAAAGCTAGTTCCTCCATTGCTCTTTTCGTCACACTCAATGTTCTCTTCTTTGCACTTGTCTCCGGATGTGGAAACAAATGCAATAGTCCCGGTTCCAATCCAAATCCTAACCCTAACCCTAACCCTAGTCCTTCAAGTGGCGGATCATGCTCACGTGATGCGCTCAAACTAGGCGTGTGCGCCAATGTGCTCAACGGTTTGTTGAATGTGACTTTGGGACAGCCACCAGTTACCCCTTGCTGCTCCCTCCTCGCCGGCCTCGTTGACCTTGAAGCCGCCGCGTGCCTCTGCACCGCTCTTAGGGCAAATGTTTTGGGCATCAATCTCAACCTTCCCATCTCACTTAGCTTGCTCCTTAATGTTTGCTCAAGGAAAGTGCCACATGGCTTCCAATGCAACTAA 414 0.5048 MASNKASSSIALFVTLNVLFFALVSGCGNKCNSPGSNPNPNPNPNPSPSSGGSCSRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLAGLVDLEAAACLCTALRANVLGINLNLPISLSLLLNVCSRKVPHGFQCN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01458 137 Gene3D - 53 137 IPR036312 -
Aip01g01458 137 CDD HPS_like 56 136 IPR027923 -
Aip01g01458 137 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Aip01g01458 137 SMART aai_6 54 136 IPR016140 -
Aip01g01458 137 PANTHER - 8 136 - -
Aip01g01458 137 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 56 136 IPR036312 -
Aip01g01458 137 Pfam Hydrophobic seed protein 54 136 IPR027923 -
Aip01g01458 137 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 8 136 - -
Aip01g01458 137 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01458 Aip-Chr1 46432197 46433102 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01458 45 136 Acyl Lipid Metabolism Gene Families AT4G22490 43.158 8.41e-16 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01458 - - gmx:100801985 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01458 01 46432197 46433102 Aip01g01458 01 46432197 46433102 ECH