Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01449 ATGGCTTCAAAGAGTGCTCTTCTCATTGCCCTCAACATTCTCTTCTTCACAGTTGTAACCTCAAACTACGTGCCATGTCCACCACCACCAACCAAAAGCCACAACCACAAACCGCCGCACCCGAGCGTCCCATCAATCCCTAAACCGCCATCCACAAAGCCCCCCTCACAACCCAAATGCCCAAGAGACACGCTCAAGTTGGGCGTGTGCGCCAACGTGTTGGGTTTGGTGAACGTTCAGCTTGGAAATCCAGCAAAGACACCATGCTGCTCCCTCATTAATGGCCTCGTTGATCTTGAAGCCGCTCTTTGCCTTTGCACCGCTCTTAAAGCCAATTTGCTTGGTATCAATCTTAACATTCCAATCAGCTTGAGTTTGATTCTCAACTACTGTGGAAAAGGTGTCCCTAACGGATTTGTCTGCCCTTAA 429 0.4942 MASKSALLIALNILFFTVVTSNYVPCPPPPTKSHNHKPPHPSVPSIPKPPSTKPPSQPKCPRDTLKLGVCANVLGLVNVQLGNPAKTPCCSLINGLVDLEAALCLCTALKANLLGINLNIPISLSLILNYCGKGVPNGFVCP 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01449 142 Pfam Hydrophobic seed protein 60 142 IPR027923 -
Aip01g01449 142 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 62 142 IPR036312 -
Aip01g01449 142 PANTHER - 3 141 - -
Aip01g01449 142 SMART aai_6 60 141 IPR016140 -
Aip01g01449 142 Gene3D - 57 142 IPR036312 -
Aip01g01449 142 MobiDBLite consensus disorder prediction 29 60 - -
Aip01g01449 142 CDD HPS_like 58 141 IPR027923 -
Aip01g01449 142 MobiDBLite consensus disorder prediction 29 57 - -
Aip01g01449 142 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15-LIKE 3 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01449 Aip-Chr1 46138207 46139054 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01449 59 142 Acyl Lipid Metabolism Gene Families AT4G22490 40.476 6.83e-16 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01449 - - gmx:100500229 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01449 01 46138207 46139054 Aip01g01449 01 46138207 46139054 ECH