Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01328 ATGGAGATTGCTGCTACCGCAGCTTCCACCTTCTCCCTCAACAGACCGACACTCCCCTTTCCATCTTCTTCTAGAATCCGTCCCCCCATCAGAGCCCTCAACTCCTCTTCCTCCTCCGCCTCTTCCCCCGCAGCCCTCAGAGCCTCTCTCTCTACCAATTTTGTTGCCCCTTTCGCCACCTCCGCCAGCAGCGCCTCCAGCCCCTTCGCCGGCCACAAGCTACGCCCTTCTTCTCTCAATCCGGCGTCGTTTCGTGGCATCAAGGGTAAACGAGGCGTCGTTACTATGGTTATTCCTTTCTCTAGAGGAAGTGCATGGGAGCAACCTCCACCAGATTTAGCTTCCTACTTATACAAAAATCGAATTGTTTATTTGGGCATGTCTCTTGTTCCATCCGTTACAGAGTTAATACTAGCTGAATTTCTTTACCTTCAGTATGAAGATGAGCAAAAGCCTATTTACCTATACATAAACTCCACTGGGACAACTAAGGGAGGTGAGAAGTTGGGTTATGAGACCGAAGCATTTGCAATTTATGATGTGATGAGGTATGTCAAGCCTCCTATATTTACCCTTTGTGTTGGTAATGCTTGGGGAGAAGCAGCTTTGCTTTTGGCTTCTGGTGCAAAGGGAAACCGTTCTGCTTTGCCATCATCAACAATAATGATAAGACAGCCAATAGCAAGGTTTCAAGGACAAGCAACGGATGTTAACCTTGCAAGAAAAGAAGTCAATAATGTGAAGACAGAATTGGTTAAATTATATGCAAAGCATATTGAAAAAACACCTGAGCAGATTGAAGCTGATATTCAGCGCCCAAAGTATTTTAGTCCAAGTGAAGCTGTTGAATATGGCACAGCTTATTTAGCTGTTCGAGAGGTTGAATCGCTAGTTGTTAAAGAGTTTTTCAGACAATGGAGACTGGGAAATGCGAGTCAGCTCAAATGGAAGACGTAG 957 0.4556 MEIAATAASTFSLNRPTLPFPSSSRIRPPIRALNSSSSSASSPAALRASLSTNFVAPFATSASSASSPFAGHKLRPSSLNPASFRGIKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEQKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARKEVNNVKTELVKLYAKHIEKTPEQIEADIQRPKYFSPSEAVEYGTAYLAVREVESLVVKEFFRQWRLGNASQLKWKT 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01328 318 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 28 287 IPR023562 -
Aip01g01328 318 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 28 287 - -
Aip01g01328 318 PRINTS Clp protease catalytic subunit P signature 191 208 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aip01g01328 318 PRINTS Clp protease catalytic subunit P signature 269 288 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aip01g01328 318 PRINTS Clp protease catalytic subunit P signature 212 231 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aip01g01328 318 PRINTS Clp protease catalytic subunit P signature 152 172 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aip01g01328 318 PRINTS Clp protease catalytic subunit P signature 112 127 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aip01g01328 318 Gene3D - 86 289 - -
Aip01g01328 318 Pfam Clp protease 112 285 IPR023562 -
Aip01g01328 318 SUPERFAMILY ClpP/crotonase 107 285 IPR029045 -
Aip01g01328 318 Coils Coil 237 257 - -
Aip01g01328 318 CDD S14_ClpP_2 112 285 IPR001907 GO:0004176|GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01328 Aip-Chr1 39441822 39447769 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01328 K01358 - gmx:100780029 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01328 01 39441822 39447769 Aip01g01328 01 39441822 39447769 ECH