Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00913 ATGGGCTTTGACTTGGGGCTTTTGTCCTTCAATGCACCAAACTTGAGTCTTGTTTCTCCTCCCTTTTCTCACTATTCTCCTAGAATCTTCCTTAGTTTTTGTGGAATAATGGTAGTAGAAGAAGGAAGCTTTTTCAACAAGGATGTTCTAGTAATAAAGGCTCAGAAGAAATCACCACTTGTATTGAGGATGTCAGTGTTGGTATTCTCAATGGTGTGTGGGGTTTTTATTTGCTGTGTTTGTTTGAAGCAGATAAGGACTCAAGCAAGGACTAAACTTTTGGAGTTACAAACCATTCAGAACCCTTCTTCCCAGAGTGTACTGAAGATAACAGATACACACCTTCACTACCCTAACCCTGTCTCTTTTAATAGGAATGAGTGTGCTCGAAACCCTGTGCATTTCTTTGCCATATTGTCAAACCAAAGGTCAGGGAGTGGGTGGTTTGAGACCCTTTTGAATAGCCACATAAATGTGAGCTCAAATGGGGAGATATTTTCTGTAAGAGAGAGAAGAATGAATGCTTCCACAATTGTGAAGACTTTGGATAAAGTTTATAGTTTGGACTGGGTCAGTAGTGCTTCAAAGAATGAGTGCTCTGCTGCAGTTGGCTTAAAGTGGATGCTTAATCAGGGGCTGATGGAGCACCCCAAGGAAATAGCAGACTACTTCAACCATAGAAGTGTTTCTGTAATATTTCTTTTGCGGAGAAACTTGTTACGCAGATTGGTATCAACGCTGGCCAATTCCTACGATCGTTATGCCAAGTTATTGAATGGGACTCATAAGTCTCACGTTCATTCCACAGAAGAGGCTGATACTCTATTACAGTACAAGCCTGCCATAAATTCTACATCATTGCTGACCAACTTGAAAGATATGGAGACAAGAGTTGCAAAGGCGTTAGAATACTTCAGCACTACTCGGCATATGATCCTGTACTATGAGGATCTTATACGAAATCCTACTGAGCTAAAACGTGTGCTAGACTTTTTAGGATTGCCGCAGATGGAGTTAACGAGCCGGCAGGTTAAGATCCATAGAGGACCGTTATCCGACCACATTAAAAACTGGGAAGATGTTAACAAGACGTTGCAAGGAACCGCATATGAGAGTTTTCTCCAAGCTGACTATTAA 1137 0.4134 MGFDLGLLSFNAPNLSLVSPPFSHYSPRIFLSFCGIMVVEEGSFFNKDVLVIKAQKKSPLVLRMSVLVFSMVCGVFICCVCLKQIRTQARTKLLELQTIQNPSSQSVLKITDTHLHYPNPVSFNRNECARNPVHFFAILSNQRSGSGWFETLLNSHINVSSNGEIFSVRERRMNASTIVKTLDKVYSLDWVSSASKNECSAAVGLKWMLNQGLMEHPKEIADYFNHRSVSVIFLLRRNLLRRLVSTLANSYDRYAKLLNGTHKSHVHSTEEADTLLQYKPAINSTSLLTNLKDMETRVAKALEYFSTTRHMILYYEDLIRNPTELKRVLDFLGLPQMELTSRQVKIHRGPLSDHIKNWEDVNKTLQGTAYESFLQADY 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00913 378 PANTHER SULFOTRANSFERASE 40 378 - -
Aip01g00913 378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 360 IPR027417 -
Aip01g00913 378 Pfam Sulfotransferase domain 138 338 IPR000863 GO:0008146
Aip01g00913 378 Gene3D - 134 363 IPR027417 -
Aip01g00913 378 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 40 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00913 Aip-Chr1 17068544 17072469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00913 - - gmx:100795357 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00674 05 8495842 8498832 Aip01g00913 01 17068544 17072469 ECH
Aip07g02677 07 110764002 110772544 Aip01g00913 01 17068544 17072469 ECH
Aip06g03824 06 135943070 135948414 Aip01g00913 01 17068544 17072469 ECH
Aip01g00913 01 17068544 17072469 Aip01g00913 01 17068544 17072469 ECH
Aip01g00913 01 17068544 17072469 Aip05g00674 05 8495842 8498832 PCT