Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00716 ATGAGAAGGCGACCTGGAATCGGAGGGTTGCAGACAGCTGCAGCAGCAAGGGATCAGTATCGGTTGCTTGGTGAGAATGTCGCAAAGATCAGAACCGATTTGATGAAGGAACAGCTTGCCACTTTTCGATCCCAGCTTGAAGATTTTGCTCGCAAGCACAAGAATGACATCCGCAAGAACCCTGCGTTCAGATCACAGTTCCACGAGATGTGTGCTAAAGTTGGAGTAGATCCATTGGCCTCAAACAAAGGTTTCTGGGCAGAGCTTTTAGGAATTGGTGACTTCTATTATGAACTTGGAGTTCAAATAGTCGATATTTGCTTGGCCACTAGACCACACAATGGAGGACTGATCAACCTTCAGGAACTCTGCCATCTCCTTCGTCAGAGACGGAAAAGTGATAGGGGAGTTGTTTCTGAGGATGATTGCCTTCGGGCTATCAGCAAACTAAAGGTGTTGGGTAGCGGTTTTGAAGTTTTTTCAGTTGGTAAAAAAAAGCTTGTCCGTTCAGTTCCAACTGAGTTGAACAAAGACCACAATGAAATTCTAGAGCTTGCCCAGGCTCAAGGATATGTGACCGTTGAAGAAGTAGAGAGGCGGCTATCTTGGACTTCGGGCCGTGCTATTGATGCACTTGATACATTACTTGATGAAGGACTTGCAATGATCGATGATGGCCATCGAGATGGTAAACGGCGTTACTGGTTTCCCTGTGTATCTCCCATCTCATCTTCAATAGGAGTTGATTCCTAA 753 0.4582 MRRRPGIGGLQTAAAARDQYRLLGENVAKIRTDLMKEQLATFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPHNGGLINLQELCHLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVFSVGKKKLVRSVPTELNKDHNEILELAQAQGYVTVEEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHRDGKRRYWFPCVSPISSSIGVDS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00716 250 SUPERFAMILY "Winged helix" DNA-binding domain 24 174 IPR036390 -
Aip01g00716 250 Pfam EAP30/Vps36 family 6 225 IPR040608 -
Aip01g00716 250 PANTHER EAP30 SUBUNIT OF ELL COMPLEX 1 241 IPR016689 GO:0000814|GO:0071985
Aip01g00716 250 Gene3D - 24 85 - -
Aip01g00716 250 Gene3D - 91 171 IPR036388 -
Aip01g00716 250 Gene3D - 172 248 IPR036388 -
Aip01g00716 250 PIRSF ESCRT2_Vps22 1 245 IPR016689 GO:0000814|GO:0071985
Aip01g00716 250 SUPERFAMILY "Winged helix" DNA-binding domain 175 238 IPR036390 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00716 K12188 - gmx:100781799 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00716 01 11879239 11883355 Aip01g00716 01 11879239 11883355 ECH